| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5083 |
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| Symbol | |
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| ID | 5750694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5634708 |
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| End bp | 5637095 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300207 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001566097 |
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| Protein GI | 160900515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.79366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0431885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AAACCTCTCT GGATCTGGCA CAACAGGCGG CCGGCGATGC ACTGGACCTG
GGCCAGTACG CGCAACGGGC CTATCTCGAA TACGCACTGT CCGTGGTCAA GGGCCGGGCA
CTTCCCGACG TGACCGACGG CCTCAAGCCC GTGCAGCGGC GCATTCTGTA CGCCATGGAC
CGCATGGGCC TGAGCTACAG CGGTCCCAAC CACAACACGG CGGCCAAGCC CGTCAAGAGC
GCACGCGTGG TCGGCGATGT GCTGGGCCGC TTTCACCCGC ACGGCGACCA GTCGGCCTAC
GACGCGCTGG TGCGCATGGC GCAGGACTTC AACCAGCGCT ATCCGCTGGT CGATGGCCAG
GGCAACTTCG GCAGCCGCGA CGGCGACGGC GCAGCCGCCA TGCGCTACAC CGAGGCGCGC
CTGTCCAAGA TCACGGGCCT GCTGCTCGAC GAGATCGACA TGGGCACGGT GGACTTCGTG
CCCAACTACG ACGGCAGCAC GCAGGAGCCG CAGCAACTGC CCGCGCGCCT GCCGTTCGCC
CTGCTCAATG GCGCCAGCGG CATTGCCGTG GGCCTGGCCA CGGAAATCCC CAGCCACAAC
CTGCGCGAGG TGGCCGACGC CTGCGTGGCC CTGATCAAGC GGCCCCAGCT CAGCGACGAG
GAACTGTTCC AGATCATCCC CGGCCCCGAC TATCCGGGTG GCGGGCAGAT CATCAGCAGC
GCCTCCGACA TCCAGGACGC CTATCGCACG GGCCGTGGCA GCCTCAAGCT GCGCGCGCGC
TGGAAGATCG AGGAGCTGGC GCGCGGCCAG TGGCAGATGG TGGTGACCGA GCTGCCGCCC
GGCGTCTCGG CGCAGAAGGT GCTCGAAGAG ATCGAGGACA TCACCAATCC CAAGGTCAAG
ACCGGCAAGA AGGCCTTGAG CCAGGAACAG ACCCAGCTCA AGGCCAGCAT GCTGGCCGTG
CTCGACGGCG TGCGCGACGA GTCCAGCAAG GATGCGCCGG TGCGCCTGGT CTTCGAGCCC
AAGACCGGCA AGGTGCCGCA GCAGGAACTG ATCACGGCGC TGCTGGCGCA TACCAGCCTG
GAGTCGTCCA GCTCCATCAA CCTGACCATG ATCGGCCTCG ATGGCCGTCC GGTGCAGAAA
AGCTTGCGCC TGATGCTCGA GGAATGGATC GCCTTCCGCC AGACCACGGT CACGCGGCGC
AGCCAGCACC GGCTGGCCAA GGTGCTGGAC CGCATCCACA TCCTCGAAGG CCGGCAGGCC
GTGCTGCTGA ACATCGACAA GGTCATCGCC ATCATCCGGG CCAGCGACGA GCCCCGGCAG
GCGCTGATCG ATGCCTTTGC GCTGTCCGAG CGCCAGGCCG ACGACATTCT TGAAATCCGC
CTGCGCCAGC TGGCGCGGCT GGAGGCCATC AAGATCGAGC AGGAACTCAA GGAGCTGCGC
ACGGAGCAAG GCAAGCTCGA AGACATCCTG GGCAGCGAAA GCACCATGCG CCGCCTGATC
TGCAAGGAGA TCGAGGCCGA TGCCAAGCAG TTCGCCGATG CGCGCCGCAC GCTGATCCAG
GAGGAAAAGA AGGTCGTCGC CGAGGTCAAG GTGGTCGATG AACCCACCAC GGTCATCATC
TCGGACAAGG GCTGGGTGCG CACGCGCCAG GGCCATGGCG TCGATGCGGG CACGCTCAGC
TTCAAGGCCG GCGACAGCCT GCACGGCACC TTCGAATGCC GCACCGTGGA CCAGTTGCTG
GCCTTTGGCA GCAACGGCCG CATCTATTCG GTGCCGGTGG CGCAACTGCC CGGCGGGCGC
GGCGATGGCC AGCCCGTGAC CACGCTCATC GAGCTGGAGG CCGGCACCCA GATCCTGTAC
TACTTCGCCG GTGCCGAGGG CACGGCGCTG CTGCTGTCGG GGTCGGGTGG CTACGGCTTC
GTGGCCATGG TGGGCGACAT GGTCTCGCGC CAGAAGGCGG GCAAGGCCTT CGTCACGCTG
GCCGACGGCG AGACGCTGTG CGCCCCGTCC ACGGCCTACG GCGTTCCCAT GGGCGCACGC
GCCGAGCCGC AGGAAGGAGA GCAGGGCGCG GGCCTGCTGC TGCCAGCCAC GCATGTGATC
TGCGCTTCCA CGGGTGGCCG CATCCTCACC TTCGAGATCG CCAGCCTCAA GCACATGGCC
AAGGGCGGTC GCGGCCTCAT GCTGCTCGAC CTGGAGGACA AGGACACGCT GGCGGGCGCT
GCCGCCTACA CGCGCAGCAT CCGCATCGAT GGCGTGGGCC GCGGCGGCAA GGAGCGCAGC
GAGACGCTGG AGATCCGCAG TCTCAACAAT GCCCGTGGCA CGCGCGGCCG CAAGGGCAAG
TCGGCCGACC TGGGCTTCAA GCCGCAAAGC GTGACGCGCG TGGAGTAA
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| Protein sequence | MSDQTSLDLA QQAAGDALDL GQYAQRAYLE YALSVVKGRA LPDVTDGLKP VQRRILYAMD
RMGLSYSGPN HNTAAKPVKS ARVVGDVLGR FHPHGDQSAY DALVRMAQDF NQRYPLVDGQ
GNFGSRDGDG AAAMRYTEAR LSKITGLLLD EIDMGTVDFV PNYDGSTQEP QQLPARLPFA
LLNGASGIAV GLATEIPSHN LREVADACVA LIKRPQLSDE ELFQIIPGPD YPGGGQIISS
ASDIQDAYRT GRGSLKLRAR WKIEELARGQ WQMVVTELPP GVSAQKVLEE IEDITNPKVK
TGKKALSQEQ TQLKASMLAV LDGVRDESSK DAPVRLVFEP KTGKVPQQEL ITALLAHTSL
ESSSSINLTM IGLDGRPVQK SLRLMLEEWI AFRQTTVTRR SQHRLAKVLD RIHILEGRQA
VLLNIDKVIA IIRASDEPRQ ALIDAFALSE RQADDILEIR LRQLARLEAI KIEQELKELR
TEQGKLEDIL GSESTMRRLI CKEIEADAKQ FADARRTLIQ EEKKVVAEVK VVDEPTTVII
SDKGWVRTRQ GHGVDAGTLS FKAGDSLHGT FECRTVDQLL AFGSNGRIYS VPVAQLPGGR
GDGQPVTTLI ELEAGTQILY YFAGAEGTAL LLSGSGGYGF VAMVGDMVSR QKAGKAFVTL
ADGETLCAPS TAYGVPMGAR AEPQEGEQGA GLLLPATHVI CASTGGRILT FEIASLKHMA
KGGRGLMLLD LEDKDTLAGA AAYTRSIRID GVGRGGKERS ETLEIRSLNN ARGTRGRKGK
SADLGFKPQS VTRVE
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