Gene Daci_5074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5074 
Symbol 
ID5750685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5622665 
End bp5623963 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content68% 
IMG OID641300198 
Producthistidine kinase 
Protein accessionYP_001566088 
Protein GI160900506 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.299774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0561141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCC AAGGAAATGA ACTCTGCATA CTGGCAGACG CCCTCGCGGC GCAGCGCGAA 
GGACTCTTGC AGACATGGCG CAAGGCCGTC AGGCGGGACC CGGCACTGAC CGCCGGCGAG
GCGCTTCCCC GCACCCAGTT GAACGATCAC ATTCCGGCCG TGCTGGCCGC GTTCGAGCAG
CAATTGCGGG CCCTCGGCGG TGCCCCGGCA GGCGCTGCCG AGCCGCCGGT CGATGGCGAG
CAGGCCGCCG CCCACGGCCT GCACCGCTGG CAACAGGGCT ATGACCTGCA TGAGGTCGTG
CGCGAGCTGG GCCTGCTCAA CGAAGTCATG GTGGCGCAAC TGGAGGCCTA TGCCGAGGAG
CATCCCGATG CGCATGGCGC CATGCGCGTT GCGCGCAAGG CCTGGGCCGC CACCTACACG
CGCGATGTGC AGGACAGCAG CACCCAGTAT TTCCGCCTGC AGCAGCAAGA GGCCGAGGGC
CATGTCCGGG ACCTGGAAGC GGCGCTGCAT GACGTGAGCA TGCTGGACCT GCAGCGCTCG
CAACTGTGGG AGCAGGTCGC GCATGACCTG CGCAGCAACG TCGGCGTGGT GGCCAATGTG
ACGCATGGCC TGGGCATGCA GCATGCGCCG GCGCAGTCGC GCGAGAAACT CCTGCGCATG
CTGGACCGCA ACGTCCAGTC GCTGCGCCAT CTGCTGGATG ACGTGACGGA GCTGGCCAAG
CTGCACGCCG GGCGCGAGCA TCGCCAGCTG ACCTCCTTTG ACGCAGCCGA GGTGATCACC
CATCTGTGCG AGGGACTGCA GGCCCTGGCC AACGATCGCG GCCTGTACCT GCACCTGCAG
GGGCCGGGGA CGATGCCGGT GGAAGGGGAT GCCTTGAAAC TGCGCCGCAT CGCGCAGAAC
CTGATACTCA ACGCGCTCAA GTACACCCAG GAGGGCGGTG TCACGGTGAA GTGGGCTCTG
GGCGATGGGG AGGACCGGCG CCGCTGGATG CTCTCCATCG GGGACACGGG CCCTGGCATG
GCGCCTGCGG CGCCTTTGGT TGCCGCCCTC AAGCAGGCCA CGGACATGGA CCCTTCGGGC
CACCTGGGGA CGGCGGCGTC CGGGGAGGTC CGCACCGGGG GGGCGCCGCA GCAAGGCGGT
GCGGCGGCCA GCTACCGCAG CGGCGCAGGC GAGGGGATCG GCCTGTCCAT CGTCAAGCGG
CTGGCGGAAT TGCTGGACGC CACGATCGAG GTGCAGTCGG CCGCGCAGAC CGGCACGACC
TTTCTTCTGT TGTTTCCGCT GCGATATGCC GACGAGTGA
 
Protein sequence
MTSQGNELCI LADALAAQRE GLLQTWRKAV RRDPALTAGE ALPRTQLNDH IPAVLAAFEQ 
QLRALGGAPA GAAEPPVDGE QAAAHGLHRW QQGYDLHEVV RELGLLNEVM VAQLEAYAEE
HPDAHGAMRV ARKAWAATYT RDVQDSSTQY FRLQQQEAEG HVRDLEAALH DVSMLDLQRS
QLWEQVAHDL RSNVGVVANV THGLGMQHAP AQSREKLLRM LDRNVQSLRH LLDDVTELAK
LHAGREHRQL TSFDAAEVIT HLCEGLQALA NDRGLYLHLQ GPGTMPVEGD ALKLRRIAQN
LILNALKYTQ EGGVTVKWAL GDGEDRRRWM LSIGDTGPGM APAAPLVAAL KQATDMDPSG
HLGTAASGEV RTGGAPQQGG AAASYRSGAG EGIGLSIVKR LAELLDATIE VQSAAQTGTT
FLLLFPLRYA DE