| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5054 |
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| Symbol | |
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| ID | 5750665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5601421 |
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| End bp | 5602509 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300178 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001566068 |
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| Protein GI | 160900486 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.288464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.124828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCGC CCGTGCGCGT GAGCTTCGCG CCCGCCCTGT TGCAGGGCAG CGCAGGCCGG
GGCCTTGCGG CGCCTGTGTC CACAGGCGTG GCGTCCTTTG CCGTCTCCGG CTACGCGCCG
CAGGCGGTGC GGCGGTCAGA TCCGGCCGCG TTGCAAACGC TCACCGGCGA GGCCATGGGC
ACGACCTGGA GCGTGCGTCT GCACAACCCG GATTTCCGCC CGCTCGATGA GGCGCGCCAG
GCCATAGAGG CTGCGCTGGC CCTGGTCGTG CGCCAGATGA GCAACTGGGA AGCCGGCTCC
GACATCTCGC GCTTCAACCG CGCCGAGCCC GGCAGCTGGC ATGCACTGCC GCCCGAATTC
TTCACCGTGC TGGCCTGTGC ACTCGATTGG GCACAGGCCA GCGGCGGCGC CTGGGACCCT
ACCGTGGGGC CGCTGGTCGA TCTGTGGGGC TTCGGCCCGC GTGCGGAAAA GGAGCAGGGC
GCCGGCATCC CCGATGCCTA TGCGCTGCGG CGGGCGCGCG AGCGCGTGGG CTACCAGCAC
ATCGTGCTGG ACCTGGCAGG CCGGCGCGCG CTGCAGCCCG GCGCCGTACA TGTGGACTTC
AGCGGCATCG CCAAAGGCTA TTCGGTGGAC CTGGTCGCCG AGCGCCTGCA GGCGCTGGGC
CATACCGATT TCCTCGTCGA GGTGGGCGGC GAGCTGCGGG CCTGCGGTCA GCGCCCTGGC
AACCAGCCCT GGCGCGTGGC CGTGGCCAGC ATGGCGGACC AGTCCACCCC GCTGGCGCTG
CCGCTGCGCG ACATGGCCAT CGCCACCTCG GGCGACCACT GGCATGCCTT CGAGCAGGGC
GGGCGCCGCT ACTCCCACAC CATCGACCCG CGCAGCGGCG AGCCCGTGGC GCATGGCCTG
ACCAGCGTCA CCGTGCTGCA TGCCGAATGC ATGCAGGCCG ACGCCCTGGC CACCGTGCTC
ACCGTGCTGG GGCCGCGCGA GGGCCTGGAC TTTGCCGAGC AGCGCGGCGT GGCGGCGCTG
CTGTGCGAGC GCACTGCGCA AGGCCCTGCC ATGGCGATGA CAACGGCTTT TGCCGCGCTG
CTGCCGTGA
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| Protein sequence | MPAPVRVSFA PALLQGSAGR GLAAPVSTGV ASFAVSGYAP QAVRRSDPAA LQTLTGEAMG
TTWSVRLHNP DFRPLDEARQ AIEAALALVV RQMSNWEAGS DISRFNRAEP GSWHALPPEF
FTVLACALDW AQASGGAWDP TVGPLVDLWG FGPRAEKEQG AGIPDAYALR RARERVGYQH
IVLDLAGRRA LQPGAVHVDF SGIAKGYSVD LVAERLQALG HTDFLVEVGG ELRACGQRPG
NQPWRVAVAS MADQSTPLAL PLRDMAIATS GDHWHAFEQG GRRYSHTIDP RSGEPVAHGL
TSVTVLHAEC MQADALATVL TVLGPREGLD FAEQRGVAAL LCERTAQGPA MAMTTAFAAL
LP
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