| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5048 |
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| Symbol | |
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| ID | 5750659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5592080 |
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| End bp | 5593588 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300172 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001566062 |
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| Protein GI | 160900480 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.528927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC CCTCCGTGTG CGCGGATCTC ATCCTCCAGA TGGACTGGCG CGGGCTGGGC
GGCGACCGCA CCCATCTCAA CCGGGGCCTG TACCTGGCCA TCCGCCAGGC CATAGACAGC
GGAGCCCTGT TGCCGCGCAG CCGTCTGCCT GCCTCGCGTG ACCTGGCGCG CGAGCTGGGC
GTGTCGCGCA ACACCGTCAA CCACGCCTAC GAGCAGCTGC AGGTGGAGGG CTATGTGCGC
AGCCAGGTGG GGCGGGGCAC GCATGTGGTG GACACCCTGC CTGCGGCCTT GCTGCTGAGC
GGCGGGCGTG CGCCCGCACG CCGCGCCACC GCCGCGGCGC CCGCACCGGG CGGCGGCCTG
TCTGCACAGG CGCAGGCCCT GCTGAGAACG GCCCAGGCCT CCGAGCAGCA ATGGGGCGCC
TTCATGCCCG GCGTGCCCGA CGTGACCGAA TTCCCGCGCG CCACCTATGC GCGCATCCAC
AACCGCCTGC TGCGCCACGC CGGACCGCAA CTGCTGACCT ACGGCACGCG CGGCGGCGTG
GACGCGCTCA AGCAGGCCCT GGCCGAGCAC CTGCGCGTGG CGCGCTCGGT GGACTGCGGG
CCGGGCCAGG TGCTGATCAC CGAAGGCGTG CACCAGGCCA TCGACCTGGT GGTGCGCAGC
CTTGCCGATC CCGGCGACTG CGTGTGGATG GAGGAGCCCG GCTACTGGGG CATTGCCAAT
GTGCTGCGCA TGCAGCATGG GCTGCACCTG CACGGCGTGC CCGTGGACGA GGAGGGCATG
CAACTGCCCG AAGGCCTGCC CGTGCCCCGG CTGATCTTCG TCACGCCCTC GCACCAATAT
CCCTTGGGCG CCGTCATGAG CATGGCCCGG CGCCGTGCAC TGATTGCCTA TGCGCGCCGC
GTGGGCGCCT GGATCGTGGA GGACGACTAC GACAGCGAAT TCCGCTTCTT CGGCAGTCCC
GTGCCCAGCA TGCAGGGCAT GGAGGAAGGT GCGCCCGTGA TCTACATAGG CACCTTCAGC
AAAACCCTCT ATCCGGGGCT GCGCATGGGC TACATGGTGC TGCCACCGGC GCTGGCCGAG
CCCCTGCGGC GCATCCATTC CGAGCTGTAC CGCGAGGGGC ACCAACTGCC CCAGCAGGTG
ATTGCCGAGT TGATCACCGA AGGCCACTAC GCCGCCCACA TCCGCAAGAT GCGCCTGCTC
TACGGCAAGC GCCGCCGCAT GCTGCTGTCC CTGATCGAGC GCTACCTGGG CGCCGACCAC
CTGCCCTGGG TGGAAAGCAG CGCAGGCCTG CATTTCGTGA TGCAGCTGCC GGGCCAGGAC
GACGATGTGG CGCTTGCCGA GGATCTCCGG CAGGCCGGCA TCTTCGTCAA GCCGCTGTCG
CGCTATTACG CAGGCCCGCA CAAGCGGCGC GGCCTGCTGC TGGGGTACGC CTGCGTCTGC
GAGGAGGAGA TTGGTGCCGC CTTCTTCCGC ATGCTGGCGG TGCTCGCAGC CCGGCATGGC
CGGGGCTGA
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| Protein sequence | MAKPSVCADL ILQMDWRGLG GDRTHLNRGL YLAIRQAIDS GALLPRSRLP ASRDLARELG
VSRNTVNHAY EQLQVEGYVR SQVGRGTHVV DTLPAALLLS GGRAPARRAT AAAPAPGGGL
SAQAQALLRT AQASEQQWGA FMPGVPDVTE FPRATYARIH NRLLRHAGPQ LLTYGTRGGV
DALKQALAEH LRVARSVDCG PGQVLITEGV HQAIDLVVRS LADPGDCVWM EEPGYWGIAN
VLRMQHGLHL HGVPVDEEGM QLPEGLPVPR LIFVTPSHQY PLGAVMSMAR RRALIAYARR
VGAWIVEDDY DSEFRFFGSP VPSMQGMEEG APVIYIGTFS KTLYPGLRMG YMVLPPALAE
PLRRIHSELY REGHQLPQQV IAELITEGHY AAHIRKMRLL YGKRRRMLLS LIERYLGADH
LPWVESSAGL HFVMQLPGQD DDVALAEDLR QAGIFVKPLS RYYAGPHKRR GLLLGYACVC
EEEIGAAFFR MLAVLAARHG RG
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