| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5039 |
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| Symbol | |
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| ID | 5750650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5577907 |
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| End bp | 5579553 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300163 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001566053 |
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| Protein GI | 160900471 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.05602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACA TTTACGACCA GCATCTGGAG CGCAACAGCG CCAACCATGC GCCGCTCAGC
CCCTTGGGCT TCATCGCCCG CACGGCCGAG GTCTATCCCG AACGGCTGGC CGTGGTCCAC
GGCACGCTGC GCCGCAACTG GGGCGAGACC TATGCGCGCT GCCGCCAGCT GGCCAGCAGC
CTGCACAAGG CGGGCGTGGG CAAGAACGAC ACCGTGGCCG TGATGCTGCC CAATACGCCG
CCCATGGTGG AGGCGCATTT CGGCGTGCCC ATGGCCGGAG CCGTGCTCAA TGCGCTGAAC
ACGCGGCTGG ATGCGGAAAC CATTGCCTTC ATGCTGGACC ACGGCGAGGC CAAGGTGCTG
ATCGTGGACC CGGAGTTCAC GGGCGTGGTG GCCAAGGCGC TGAAGCTGCG CCAGCGCAGC
GCGCCGCTGC TGGTGATCCA GGTCGAGGAC GCGCTGTACG GACCGGCCGC CGAGCAGGTG
GGCAGCCTGG ACTACGACGA CTTCGTGGCC GGTGGCGATG CCGGTTTCGA CTGGCAGCTG
CCTGCCGACG AGTGGGACGC CATTGCGCTG AACTACACCA GCGGCACCAC GGGCAACCCC
AAGGGCGTGG TCTACCACCA CCGGGGTGCG GCCATCAATG CCATCAGCAA TGTGCTGGAG
TGGGACATGC CCAAGCACGC CGTCTACCTG TGGACCCTGC CCATGTTCCA TTGCAACGGC
TGGTGCTTTC CGTGGACGGT GGCGGCGCGC GCGGGGGTCA ATGTCTGCCT GCGCCGGGTG
GAGGCACAGG CCATCTTCGA CGCCATCCGC AACCACGGCG TCACGCATTA CTGCGGCGCG
CCCATCGTGC ACGGCCTGCT GGTCAATGCG CCGGCCGCCA TGAAGGAGGG CGTGCCCGCC
GGGGTCAAGG CCATGGTGGC GGGTGCCGCG CCACCGGCGT CGATGATCGA GGGCATGGAG
CAGCTGGGCT TCGACATCAC CCATGTCTAC GGCCTGACCG AGGTCTATGG CCCGGCCACG
GTCTGCGCCA AGCACGCAGC CTGGGATGCG CTGGACATCG GCGAACGCGC GCGCCTCAAT
TCCCGCCAGG GCGTGCGCTA CCACCTGCAG CGCTCGGCCA GCGTGCTCGA TCCGGAGACC
ATGGAACCCG TGCCCCATGA CGGCCAGACC ATGGGCGAGA TCATGTTCCA GGGCAACATC
GCCATGAAGG GCTACCTGAA GAACCCGCAG GCCACGGACG AGGCCTTCCG CGGCGGCTGG
TTCCACACGG GCGACCTGGC CGTGCAGCAT CCGGACGGCT ATATACAGAT CAAGGACCGC
AGCAAGGACA TCATCATCTC GGGCGGGGAG AACATCTCGT CCATCGAGGT CGAGGACGTG
CTCTACCGCC ACCCGGCCGT GCTGGCCGCC GCCGTGGTGG CCAAGCCCGA TCCCAAATGG
GGCGAGACGC CCTGCGCCTT CATCGAGCTG AAGGCCGGCG CGCAGACCAC GGCCGAAGAC
ATCGTGGCCC ACTGCAAGAA GCACCTGGCC GGCTACAAGG TGCCGCGCGC CGTGGTCTTT
GGCGAGCTGC CCAAGACCAG CACGGGCAAG ATCCAGAAGT TCGAGCTGCG CCGGCAGGCC
GGATCGGTCC AGGCCATCAC GGGCTGA
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| Protein sequence | MTHIYDQHLE RNSANHAPLS PLGFIARTAE VYPERLAVVH GTLRRNWGET YARCRQLASS
LHKAGVGKND TVAVMLPNTP PMVEAHFGVP MAGAVLNALN TRLDAETIAF MLDHGEAKVL
IVDPEFTGVV AKALKLRQRS APLLVIQVED ALYGPAAEQV GSLDYDDFVA GGDAGFDWQL
PADEWDAIAL NYTSGTTGNP KGVVYHHRGA AINAISNVLE WDMPKHAVYL WTLPMFHCNG
WCFPWTVAAR AGVNVCLRRV EAQAIFDAIR NHGVTHYCGA PIVHGLLVNA PAAMKEGVPA
GVKAMVAGAA PPASMIEGME QLGFDITHVY GLTEVYGPAT VCAKHAAWDA LDIGERARLN
SRQGVRYHLQ RSASVLDPET MEPVPHDGQT MGEIMFQGNI AMKGYLKNPQ ATDEAFRGGW
FHTGDLAVQH PDGYIQIKDR SKDIIISGGE NISSIEVEDV LYRHPAVLAA AVVAKPDPKW
GETPCAFIEL KAGAQTTAED IVAHCKKHLA GYKVPRAVVF GELPKTSTGK IQKFELRRQA
GSVQAITG
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