| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5038 |
|---|
| Symbol | |
|---|
| ID | 5750649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5577544 |
|---|
| End bp | 5577879 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641300162 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_001566052 |
|---|
| Protein GI | 160900470 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0352813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCCA ACTACCTGTA CCTGGGCCTG GCCATCGTCG CCGAGGTGGC GGCCACCTCC
TGCCTCAAGC AGTCCGAAGG CTTCACGCGG CTGTGGCCCA GCGTGGTCAC GGTCCTGGGC
TACGCGCTGG CCTTCTACTT CCTGTCGCTG ACGCTGCGCA CCGTGCCCAC GGGCGTGGCC
TATGCGATCT GGTCCGGCGC GGGCATCGTG CTGATCTCGC TGGTGGGCTG GCTCTGGCAG
GGCCAGACGC TGGACCTGCC CGCGCTGGCG GGCATGGGCC TGATCGTGGC GGGCGTGCTG
GTCATCCAGC TGTTTTCCAA GACCGCCGGA CACTGA
|
|---|
| Protein sequence | MASNYLYLGL AIVAEVAATS CLKQSEGFTR LWPSVVTVLG YALAFYFLSL TLRTVPTGVA
YAIWSGAGIV LISLVGWLWQ GQTLDLPALA GMGLIVAGVL VIQLFSKTAG H
|
|---|
| |