| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5034 |
|---|
| Symbol | |
|---|
| ID | 5750645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5573095 |
|---|
| End bp | 5574726 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641300158 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001566048 |
|---|
| Protein GI | 160900466 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.258367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC TGCGCCGCGC CCTTGCCACC ACCCAGGCGC TCGTCCTGGC CCTGCTGCTG
GCAGGCTGCA GCCTGCCGCC GCTGGCCGGC CGCAGCGAAT CCACGGCGCT GCCGCCCGAG
GCCGCCCAGG CCACGCTGCT GGGCCAGGCG CTGGCACCGC TGCTGGACCA GCATCCGGGG
CTTACCGGCA TCCACGCGCT TTCCGATGCA CGCAACGCCT ACGCGGCGCG TGCCCTGCTG
GCTCGCGTGG CCCAGCGCAC GCTGGATGTG CAGTACTACA TCTGGCGTGA CGACACCACG
GGCCACCTGC TGCTCGACGA ACTGCGCCAG GCCGCCGACC GGGGCGTGCG CGTGCGCCTG
CTGCTGGACG ACGGCGGCAC GGCGGGGCTG GACACCCAGC TCAGCGCGCT GGACCGGCAT
CCGCAGATCG AGGTACGGCT GTTCAACCCC TTTGCGCAGC GCACGCCCAA GGCGCTGGGC
TATGTGACGG ATTTCTCGCG CACGCAGCGG CGCATGCACA ACAAGAGCTT CACGGCCGAC
AGCCAGGCCA GCATCGTGGG TGGACGCAAC ATCGGCGACG AGTACTTCGC GGCCACCGAC
GGCGTGCTGT TCGCCGACCT GGACGTGGTC GCCATGGGGC CGGTGGTGGC CGATATCGCG
CACTCGTTCG ACCAGTACTG GGCCAGCGCC TCGGCCTATC CCGTGGCCAG CCTGCTGCCG
CCGCTGCCCG ACTATGCGGT GGCGCGCGCC AGCGAGGCCC TGGCCACCGA GGTGCAGCGC
CCCGAGGCCC AGGCCTATGT GCGCGCCGTG GCGCAAAGCC CGTTCACGCA AGAGCTGCTG
GCCGGCCGCC TGCCACTGCA ATGGGCCCGC ACCACCCTGG TCAGCGACGA CCCGGCCAAG
GTGCTGGGCC AGGTGCCCAG GCAGGGGCTG CTGATCACGC AGCTGGCACC CGCCATCGGC
CAGCCGCAGC GCCAGCTGGA CCTGGTCTCG CCCTACTTCG TGCCCACCGA GGCCGGTGTG
CGCGCCCTGG CCGGCCTGCG CCGCCAGGGC ATTGCCGTGC GCGTGCTCAC CAACAGCCTG
GAGGCGACCG ACGTGGCCGT GGTCCATGCC GGCTATGCCC GGTACCGGCG CCCGCTGATC
GAGGAAGGCG TGCAGCTGTA CGAGCTGCGC CGCCAGATCG GCGAGCCGGA CACGCCCGCA
GCCGATGCAG GCGTGCCCCG GCAAGCCCCC CCGTCGCCCG CCGCGTCCTC GGGCGGGAAG
GCGGGCGTGG GTTCTGGCAG CCGCCCCGGC AGCTCGGGCT CCAGCCTGCA TGCGAAGACT
TTTGCGGTCG ATGGCGAGCG CATCTTCGTG GGCTCGTTCA ACTTCGACCC GCGCTCGGCC
CACCTCAACA CCGAGATGGG CCTGCTGATC GACAGCCCCG AGATGGCTTC GCAGATGAGC
CGCATGCTCG ACCAGAGCCT GCCGTCCGCC GCCTACCACG TGCAGATCGA TGCACAGGGC
CGCCTGAGCT GGACCACGGA AAGCGGCACG CCGCCTGAGC CACTCACCAC CACCACCGAG
CCCGGCAGCA GTGCATTCAA GCGCCTGATG CTGCGCGTGC TGGGCTGGCT GCCCATCGAG
GGGCTGCTTT GA
|
|---|
| Protein sequence | MPLLRRALAT TQALVLALLL AGCSLPPLAG RSESTALPPE AAQATLLGQA LAPLLDQHPG
LTGIHALSDA RNAYAARALL ARVAQRTLDV QYYIWRDDTT GHLLLDELRQ AADRGVRVRL
LLDDGGTAGL DTQLSALDRH PQIEVRLFNP FAQRTPKALG YVTDFSRTQR RMHNKSFTAD
SQASIVGGRN IGDEYFAATD GVLFADLDVV AMGPVVADIA HSFDQYWASA SAYPVASLLP
PLPDYAVARA SEALATEVQR PEAQAYVRAV AQSPFTQELL AGRLPLQWAR TTLVSDDPAK
VLGQVPRQGL LITQLAPAIG QPQRQLDLVS PYFVPTEAGV RALAGLRRQG IAVRVLTNSL
EATDVAVVHA GYARYRRPLI EEGVQLYELR RQIGEPDTPA ADAGVPRQAP PSPAASSGGK
AGVGSGSRPG SSGSSLHAKT FAVDGERIFV GSFNFDPRSA HLNTEMGLLI DSPEMASQMS
RMLDQSLPSA AYHVQIDAQG RLSWTTESGT PPEPLTTTTE PGSSAFKRLM LRVLGWLPIE
GLL
|
|---|
| |