Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5032 |
Symbol | |
ID | 5750643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5570070 |
End bp | 5571704 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641300156 |
Product | alkaline phosphatase |
Protein accession | YP_001566046 |
Protein GI | 160900464 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.4039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTGC CCTTCAGCGC CTCCGTCCCT GCACCGCGGC GCCAGTTTCT GGTCGGCTCG GGCCTGGCCA CGGCGCTGGG CCAGTTGCCT GCCTGGGCCC GGCTGGGCGA GCGGCCTGCG CACAACCCCT TCACGCTGGG CGTGGCCAGC GGCGACCCCG AACCCGACAA CGTGCTGCTG TGGACGCGGC TGACGCCACC GCTGTCCCAG CTGGGCGAGA CCGACACCAC GGCCATGCCT GCGCTCAAGA TCCGCTGGGA GCTGGCGCAC GACCCGCTGT TCCGCCACAT CGTGCGCAGC GGCGAGGCCA TGGCCCAGCC CGAATGGGGC CACGGCGTGC ATGTGCAGGT GGGAGGACTG GCGCCCGACC GCTGGTACCA CTACCGCTTC ATGCTGGGAC AGGCGGTCAG CGGCACGGGC CGCTGCCGCA CGGCGCCCGC CCCCGGCAGC ATGCCGCAGC GCCTGCGCCT GGCCTATGCC TCCTGCCAGC GCTGGGAGCA CGGCTACTAC GCGGCCTGGC GCCAGGTGGT GCAGGATGCG CCGGACCTGG TGATCTTCCT GGGCGACTAC ATCTACGAAT ACGCCACGCC CGCCATGACG CTGGGCCTGG CCCGCACGCA CAACCTGCGC GCCGCGCAGA CCCTGCAGGA CTACCGCGAC CGCTACGCCC TGCACAAGAG CGACCCGCTG CTGCAGGCCG CGCACGCCCT GTGCAACTGG TCCGTGGGCT GGGACGACCA TGAGGTGGAA AACAACTACG CGGGCGACCA GGGCCAGGGC GATGCCGCGC GTTTCCTGGC CCGGCGCATG GCCGCCTGGC AGGCCTTCTA CGAAAACATG CCGCTGCGTG CCAGCGCGCT GACGGGCGCC GGGGCATCGC ATGGCGGCGG CGGCCTGCAG CTGTACCGCA GCCTGCAATG GGGCCGGCTG GCCCGGCTGC ATCTGCTGGA CGGCCGCCAG TACCGCAGCG CCCAGGCCTG CCGCACCGAG GGCGAGGCAG ACAAGGGCAG CGTGCGCCCT GCGCAATGTG CGGCCCTGTC GGACACGGCG CGCAGCTTCC TGGGCTGGAC TCAGGAGCAG TGGCTGTACC GCCAACTGGC CGAGGACGCA CGCCACCAGG GCAGCGAGGG GCCGCGCTGG AGCATCCTGG CCCAGCCCAC CCTGCTGTCG GCGCACCGGC CGCCCTCGGG ATCGCAGGCC ACGGACAGCT GGGACGGCTA CCCGGCCGCG CGCCAGCGCC TGGTGCGCCA CCTCACGCCG GGCGCCCAGC CCACGCCGCG CAACAGCGTG CTGCTGGGCG GCGACCTGCA CCAGAACTAC GTCTGTGCCG TGCATGCCGA TCCCGAGGCC GCGCCCGAAC GGCGCAACCC CATCGTGGCC AGCGAGTTCT GCAGCACCTC GATCACCTCG CGCAGCGGCA CCACACAGGC CAAGGTCGAT GCCATCGTCG CCCACAACCC GCAGGTGCTG TACGCACGCT GCGAGGAACG CGGCTATGGC CTGGCAGACA TCACGCCCGA ACGCTGGACC AGCGAGCTGC GTGCCGTGGC CAACCCCATG CGCGCCGACA GCCGCATCTA CACGCTGGCC CGCTTCACCG TCGAGGACAG GCGGCCCGGC CCCGTAGCCA GCTGA
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Protein sequence | MHLPFSASVP APRRQFLVGS GLATALGQLP AWARLGERPA HNPFTLGVAS GDPEPDNVLL WTRLTPPLSQ LGETDTTAMP ALKIRWELAH DPLFRHIVRS GEAMAQPEWG HGVHVQVGGL APDRWYHYRF MLGQAVSGTG RCRTAPAPGS MPQRLRLAYA SCQRWEHGYY AAWRQVVQDA PDLVIFLGDY IYEYATPAMT LGLARTHNLR AAQTLQDYRD RYALHKSDPL LQAAHALCNW SVGWDDHEVE NNYAGDQGQG DAARFLARRM AAWQAFYENM PLRASALTGA GASHGGGGLQ LYRSLQWGRL ARLHLLDGRQ YRSAQACRTE GEADKGSVRP AQCAALSDTA RSFLGWTQEQ WLYRQLAEDA RHQGSEGPRW SILAQPTLLS AHRPPSGSQA TDSWDGYPAA RQRLVRHLTP GAQPTPRNSV LLGGDLHQNY VCAVHADPEA APERRNPIVA SEFCSTSITS RSGTTQAKVD AIVAHNPQVL YARCEERGYG LADITPERWT SELRAVANPM RADSRIYTLA RFTVEDRRPG PVAS
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