Gene Daci_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5030 
Symbol 
ID5750641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5567372 
End bp5568352 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID641300154 
Productalcohol dehydrogenase 
Protein accessionYP_001566044 
Protein GI160900462 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTT GGCTTTGCAC CACGCCCACA GGCGTCGATC AACTGCAGTG GACGCAGCTG 
CCCACGCCCA CGCCGGGCCC GGGGCAGGTA CTGCTCGAAG TGAAGGCGGC CAGCCTGAAC
TTTCCCGATC TGCTGATCGT GCAGAACAAG TACCAGATGA AGCCTGAGCT GCCGTTCGTG
CCGGGCTCGG AATACGCGGG CGTGGTCCAG GCCGTGGGTG AAGGCGTGAG CCACCTGGCC
GTGGGCCAGC GCGTGGCCTG CCTGTCGGGC ACGGGGGGCT TCGGCACCCA TACGCTGGCG
CCGGCCGCGC TGTGCATGCC GCTGCCAGAC GGTTTCAGCT TCGTCGATGC TGCGGCCTTC
ATCATGACCT ATGCCACCTC GCACCATGCG CTGATCGACC GCGGCCAGCT GCGCGCGGGC
GAGACCGTGC TGGTGCTGGG CGCGGCAGGC GGCGTGGGCA CGGCCGCCAT CCAGATCGCC
AAGGCGGCGG GTGCGCGTGT GATCGCAGCG GCCTCCACCG ACGAAAAGTG CGCGCTGTGC
AAGGCACAGG GCGCCGATGC CACCATCAAC TACAGCCAGG GCGATCTGCG CGCCGCCATC
AAGGAAGCCA CCGACGGCAA GGGCCCCGAC GTGGTCTACG ACCCCGTGGG CGGCGACTTC
GCCGAGCCGG CCTTCCGCTC CATCGCCTGG CGCGGCCGCT ATCTGATCGT GGGCTTTGCC
GCTGGTCCGA TTCCTGCCCT GCCGCTGAAC CTGCCGCTGC TCAAGGGCGC ATCGCTGGTG
GGCGTCTTCT GGGGCGAGTT CTCCCGGCGC GAGCCCAAGG CCAATGCGGC CATGATGCAG
GAGCTGGCGC AGTGGTACGG CCAGGGAAAG ATCAAGCCCG TGATCGATCG CACCATGCCC
ATGGCCGAGC TGCACGCCGC CTATGCGCGC ATGGGATCGC GCCAGGTGCA GGGCAAGCTG
GTGATGGTCA ACGAGCAGTG A
 
Protein sequence
MHAWLCTTPT GVDQLQWTQL PTPTPGPGQV LLEVKAASLN FPDLLIVQNK YQMKPELPFV 
PGSEYAGVVQ AVGEGVSHLA VGQRVACLSG TGGFGTHTLA PAALCMPLPD GFSFVDAAAF
IMTYATSHHA LIDRGQLRAG ETVLVLGAAG GVGTAAIQIA KAAGARVIAA ASTDEKCALC
KAQGADATIN YSQGDLRAAI KEATDGKGPD VVYDPVGGDF AEPAFRSIAW RGRYLIVGFA
AGPIPALPLN LPLLKGASLV GVFWGEFSRR EPKANAAMMQ ELAQWYGQGK IKPVIDRTMP
MAELHAAYAR MGSRQVQGKL VMVNEQ