Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5029 |
Symbol | surE |
ID | 5750640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5566469 |
End bp | 5567338 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641300153 |
Product | stationary phase survival protein SurE |
Protein accession | YP_001566043 |
Protein GI | 160900461 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGAG TGTGGTGGGA ATGCCTCCTG TCCCTCGGGC GACGAGACGC CCGCCTACAA TCGCCCGCAA TCCCTGCTGT ATCCATGAAG ATTCTCATTT GTAACGACGA CGGCTACCAG GCGCCCGGCA TCCAGGCCCT GTACGAGGCG CTGCGCACGG TGGCAGACGT CGAGGTGGTG GCACCGGAGC ACAACAACAG TGCCAAGTCC AACGCCCTGA CGCTGAACGC GCCGCTGTAT GTGCACCAGG CCCACAACGG CTTTCGCTAT GTCAATGGCA CGCCTGCGGA CTGCGTGCAC ATCGCCCTGA CCGGCCTGCT GGGCTACCGG CCCGACCTGG TGGTTTCCGG CATCAACAAC GGCGCCAACA TGGGCGACGA CACCATCTAT TCCGGCACCG TGGGCGCCGC CATGGAAGGC TTTCTGTTCG GCATTCCCTC CATTGCCTTC TCGCAGGTGG ACAAGGGCTG GTCCGAGATC GAGGCCGCTG CCGCCGCCGC GCGCCAGCTG GTCATGGACA TGCAATCGCA GGAGCTGATC GGCCTGTCGC CCTGGCTGCT CAACGTGAAC ATTCCCAACA TGCCCTTGTC CGCGCTCAAG CCCCTCAAGC TGTGCCGGCT GGGCCGCCGC CATGCGGCCG AACGCGTCAT CACCCAGGAG AGCCCGCGCG GCGAAATGAT GTACTGGATA GGCAGCGCAG GCGCGGCCAA GGATGACTCG GAGGGCACGG ACTTCCACGC CACGGCGCAC GGCCATGTGT CCGTCACGCC GCTGAAGGTG GACCTGACCG ACCACGACAA CCTGGGCTAC TGGGCACAGA CGGCGGCCAG GCTGGCGTCG GCCGGCCAGG GCGGGGCGGT GCAACCGTGA
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Protein sequence | MIGVWWECLL SLGRRDARLQ SPAIPAVSMK ILICNDDGYQ APGIQALYEA LRTVADVEVV APEHNNSAKS NALTLNAPLY VHQAHNGFRY VNGTPADCVH IALTGLLGYR PDLVVSGINN GANMGDDTIY SGTVGAAMEG FLFGIPSIAF SQVDKGWSEI EAAAAAARQL VMDMQSQELI GLSPWLLNVN IPNMPLSALK PLKLCRLGRR HAAERVITQE SPRGEMMYWI GSAGAAKDDS EGTDFHATAH GHVSVTPLKV DLTDHDNLGY WAQTAARLAS AGQGGAVQP
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