| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5026 |
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| Symbol | |
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| ID | 5750637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5563722 |
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| End bp | 5564792 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300150 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001566040 |
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| Protein GI | 160900458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.257508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA GCACCAGGCA AACCGGACAA GCCCCTGCCC CGCAGGGGCT TGTTTCTTCT
GCGCCCGGCG AATCGCCGTG GGAGCCGGTC GAGGACGAGG CCGAAGGCGG CGAGGTCGAG
GCCGCCGCAG CCGAGCTGCG CGAGATCACC GTGCCGCCGG CCCAGCACGG CCTGCGCGCC
GACAAGGTGC TGGCCGAATG CGTGGCCGAG TTCTCCCGCA GCTATCTGCA GCAACTGCTG
GCGCAGGGCG CGGTCACGCT CAATGGGCGT GTGCTGGTCA AGCCGGCCAC CAAGGTGGCC
GCCGGCGACC GGATGGTGCT GGAGATGCGG CCCACGCAGC AGAGCATGGC CTTCCAGCCC
GAAGACATGG CGCTGGACGT GGTGTATGAG GACGAGCACC TGCTGGTCGT CAACAAGCCG
GCTGGCCTGG TCGTGCACCC GGCTCCGGGC AATTGGACGG GAACCCTGCT CAACGGCCTG
CTGGGACGCG ACCCCAAGGC GCGGGAGGTG CCGCGCGCCG GCATCGTCCA CCGCCTGGAC
AAGGACACCA GCGGGCTCAT GGTGGTGGCG CGCAGCCGCG CCGCCATGGA CGCGCTGGTG
GCCATGATTG CCGCGCGCGA TGTCAGCCGC CAGTACCTGG CGCTGGCCCA CAAGGCCTGG
GGCCCGCGCA AGCACCGCGA GGTCGATGCG CCCATCGGCC GCGACCCGCG CAACCGCCTG
CGCATGGCCG TGGTCGACCT GGCGCAGCAT GCAGGCAAGA CCGCGCGCAC CGACATCGAC
CTGCTGGCCG GCAACGAGGA AGTCAGCCTG GTGCGCTGCA CGCTGCACAC GGGCCGCACC
CACCAGATCC GCGTGCACAT GGCATCGCTG GGCCACCCGC TGGTGGCCGA TGCCGTCTAC
GGCGGCAAGG AGGCTGGCGG CATGGCGCGC CAGGCGCTGC ACGCCTTCCG GCTGGCCTTC
ACCCATCCCA TGACAGGCCA GGCCCTGGTG CTGCGCGCTC CGCTGCCGCC CGATATGGCA
CAGGCGCTGG AAAATTGGGG GCTGAGCTAC AATCCCGCCG AAAGCCTCTG A
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| Protein sequence | MSRSTRQTGQ APAPQGLVSS APGESPWEPV EDEAEGGEVE AAAAELREIT VPPAQHGLRA
DKVLAECVAE FSRSYLQQLL AQGAVTLNGR VLVKPATKVA AGDRMVLEMR PTQQSMAFQP
EDMALDVVYE DEHLLVVNKP AGLVVHPAPG NWTGTLLNGL LGRDPKAREV PRAGIVHRLD
KDTSGLMVVA RSRAAMDALV AMIAARDVSR QYLALAHKAW GPRKHREVDA PIGRDPRNRL
RMAVVDLAQH AGKTARTDID LLAGNEEVSL VRCTLHTGRT HQIRVHMASL GHPLVADAVY
GGKEAGGMAR QALHAFRLAF THPMTGQALV LRAPLPPDMA QALENWGLSY NPAESL
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