| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5019 |
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| Symbol | ispG |
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| ID | 5750630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5556343 |
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| End bp | 5557626 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300143 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001566033 |
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| Protein GI | 160900451 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.343651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGATC TCCCCATCAC GCAGCAGCCG ATAGCGATTG CCTCGCCGCT GCCGCGCAAG
TCCCGCCAGG CCCGTGTGGT CTGGCGCAAC AACGTCGTCA CCGTGGGCGG CGATGCGCCT
GTGCGCGTGC AGTCCATGAC CAACACCGAT ACGGTGGACG CGGTCGAGAC GGCCATCCAG
GTGCGCCAAC TGGCCCAGGC CGGCTCGGAG ATGGTGCGCA TCACCGTCAA CACGCCCGAG
GCGGCCGCCG CCGTGCCCTA CATCCGCGAG CAGCTGGACC GCATGGGCGA GTACGTGCCG
CTGGTGGGTG ACTTCCACTA CAACGGCCAC CGCCTGCTCA CCGAATACCC GGCCTGCGCC
GAGGCACTGT CCAAGTACCG CATCAACCCC GGCAACGTGG GCAAGGGCGA CAAGAAGGAC
AAGCAGTTCG GCCAGATGAT CGAGGCGGCG GCCCGCTACG ACAAGGCCGT GCGCATCGGT
GTCAACTGGG GCTCGCTGGA CCAGGAACTG ATGGCCCGGC TGATGGACGA GAACTCGCGC
CGCGCCCAGC CCTGGGACAC GCGCCAGGTC ATGTTCGAGG CGCTGATTTC CTCGGCCGTC
GATTCCGCGC GCCTGGCCGA GTCCATGGGC CTGAATGGCG ACAACATCAT CCTGTCGTGC
AAGGTCAGCG GCGTGCAGGA CCTGATCTCG GTCTACCGGG CCCTGGCGCA GCGCTGCGAC
TATGCGCTGC ACCTGGGCCT GACCGAAGCC GGCATGGGCA CCAAGGGCAC GGTGGCCTCG
GCCGCCGCGC TGTCCGTGCT GCTGCAGGAA GGCATTGGCG ACACCATCCG CGTCTCGCTC
ACGCCCCAGC CCGGCGAGGC GCGCACGCAG GAAGTGGTGG TCGCCTCCGA AATCCTGCAG
GCCCTGGGCC TGCGCATCTT CGTGCCCAGC GTCACGGCCT GCCCGGGCTG CGGCCGCACC
ACCAGCACCA CCTTCCAGGA ACTGGCCAAG CAGATCGATG ACTATCTGCG TGGCCAGATG
CCGCTGTGGC GCATGAAGTA TCCCGGTGTC GAGGCGATGA AGGTGGCCGT GATGGGCTGC
ATCGTCAACG GCCCCGGCGA GAGCAAGCAT GCCAACATCG GCATCAGCCT TCCCGGCACG
GGCGAGGCGC CCGCCGCCCC CGTCTACATC GACGGGGAAA AGGCGCTCAC GCTGCGCGGC
GAGCGGATTG CCGAGGAATT CCAGGCACTG GTCGAAAATT ATGTAGCGCG CACCTATGGC
GCCACCGCCG CTGCACCTGC CTGA
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| Protein sequence | MQDLPITQQP IAIASPLPRK SRQARVVWRN NVVTVGGDAP VRVQSMTNTD TVDAVETAIQ
VRQLAQAGSE MVRITVNTPE AAAAVPYIRE QLDRMGEYVP LVGDFHYNGH RLLTEYPACA
EALSKYRINP GNVGKGDKKD KQFGQMIEAA ARYDKAVRIG VNWGSLDQEL MARLMDENSR
RAQPWDTRQV MFEALISSAV DSARLAESMG LNGDNIILSC KVSGVQDLIS VYRALAQRCD
YALHLGLTEA GMGTKGTVAS AAALSVLLQE GIGDTIRVSL TPQPGEARTQ EVVVASEILQ
ALGLRIFVPS VTACPGCGRT TSTTFQELAK QIDDYLRGQM PLWRMKYPGV EAMKVAVMGC
IVNGPGESKH ANIGISLPGT GEAPAAPVYI DGEKALTLRG ERIAEEFQAL VENYVARTYG
ATAAAPA
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