Gene Daci_5017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5017 
Symbol 
ID5750628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5554150 
End bp5554833 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID641300141 
Producthypothetical protein 
Protein accessionYP_001566031 
Protein GI160900449 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0329961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACC ATTTCGATCT CGAAGAACAA GAGCAGATAG AGCAGCTCAA GCATTTCTGG 
AATACCTGGG GCACGTTGAT CACCGGCGTG CTCGTGGTCA TCTTCGTCGG CTTTGCCGGC
TGGAATGGCT ACCAGTACTG GGAAAAGCGC CAGGCCACGC AGGCTGCCGC TCTGGCGCAT
GCCGTTGACG TGGCGCTGGC TGGCAAGGAC GCGGCGCGCG CCGGCCAGGC CTTCGCCGAT
CTCAAGGACA AGTACGCAGG TACCACACAG GCGGCCCAGG CCGGCCTGCT GCTGGCCAAG
GCTGCAGTGG ACGAAGGCAA GCTCGATGAC GCCAAGGCAG CCCTGAGCTG GGTGGCCGAC
AAGGGCGACG AAGGCTACAA GGCCCTGGCC AAGCTGCGCC TGAGCGCCGT GCTGGAGCAG
CAAAAGCAAT ACGACGAAGC CCTCAAGGCG CTGGAAGGCA GCATGCCCGA GTCCTTCGCC
GGCATCGTGG CCGATCGCCG TGGCGACATT CTTGCGGCCC AGGGAAAGCA GGCCGAGGCC
ATTGACGCCT ACCAGCGCGC CCATGCCGCC CTGGACAAGG GTGTGGACTA TGGCCGTCTG
ATCGAGTTCA AGCTCAATGC GCTGGGTGCT GAACCCACCG TGCTGGCACA GGCCAAGACG
TCGACTTCGG AGAAGCAACC TTGA
 
Protein sequence
MANHFDLEEQ EQIEQLKHFW NTWGTLITGV LVVIFVGFAG WNGYQYWEKR QATQAAALAH 
AVDVALAGKD AARAGQAFAD LKDKYAGTTQ AAQAGLLLAK AAVDEGKLDD AKAALSWVAD
KGDEGYKALA KLRLSAVLEQ QKQYDEALKA LEGSMPESFA GIVADRRGDI LAAQGKQAEA
IDAYQRAHAA LDKGVDYGRL IEFKLNALGA EPTVLAQAKT STSEKQP