Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5017 |
Symbol | |
ID | 5750628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5554150 |
End bp | 5554833 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641300141 |
Product | hypothetical protein |
Protein accession | YP_001566031 |
Protein GI | 160900449 |
COG category | [S] Function unknown |
COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0329961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACC ATTTCGATCT CGAAGAACAA GAGCAGATAG AGCAGCTCAA GCATTTCTGG AATACCTGGG GCACGTTGAT CACCGGCGTG CTCGTGGTCA TCTTCGTCGG CTTTGCCGGC TGGAATGGCT ACCAGTACTG GGAAAAGCGC CAGGCCACGC AGGCTGCCGC TCTGGCGCAT GCCGTTGACG TGGCGCTGGC TGGCAAGGAC GCGGCGCGCG CCGGCCAGGC CTTCGCCGAT CTCAAGGACA AGTACGCAGG TACCACACAG GCGGCCCAGG CCGGCCTGCT GCTGGCCAAG GCTGCAGTGG ACGAAGGCAA GCTCGATGAC GCCAAGGCAG CCCTGAGCTG GGTGGCCGAC AAGGGCGACG AAGGCTACAA GGCCCTGGCC AAGCTGCGCC TGAGCGCCGT GCTGGAGCAG CAAAAGCAAT ACGACGAAGC CCTCAAGGCG CTGGAAGGCA GCATGCCCGA GTCCTTCGCC GGCATCGTGG CCGATCGCCG TGGCGACATT CTTGCGGCCC AGGGAAAGCA GGCCGAGGCC ATTGACGCCT ACCAGCGCGC CCATGCCGCC CTGGACAAGG GTGTGGACTA TGGCCGTCTG ATCGAGTTCA AGCTCAATGC GCTGGGTGCT GAACCCACCG TGCTGGCACA GGCCAAGACG TCGACTTCGG AGAAGCAACC TTGA
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Protein sequence | MANHFDLEEQ EQIEQLKHFW NTWGTLITGV LVVIFVGFAG WNGYQYWEKR QATQAAALAH AVDVALAGKD AARAGQAFAD LKDKYAGTTQ AAQAGLLLAK AAVDEGKLDD AKAALSWVAD KGDEGYKALA KLRLSAVLEQ QKQYDEALKA LEGSMPESFA GIVADRRGDI LAAQGKQAEA IDAYQRAHAA LDKGVDYGRL IEFKLNALGA EPTVLAQAKT STSEKQP
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