Gene Daci_5002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5002 
Symbol 
ID5750613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5537637 
End bp5539052 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content63% 
IMG OID641300126 
Productglutamine synthetase, type I 
Protein accessionYP_001566016 
Protein GI160900434 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA CCGTTGCAGA CGTGTTGAAC ATGGTGAAGG AGAACGAGGT CAAATTCGTG 
GACCTTCGTT TTACGGACAC CCGTGGCAAG GAGCAGCACG TCACGGTGCC GGTGTCGCAC
TTCGACGAAG ACAAGTTCAC CTCGGGCCAC GCCTTCGACG GCTCGTCGGT GGCAGGCTGG
AAGGGCATTG AAGCATCTGA CATGCAGCTG ATGCCCGATC CCGCTACCGC GAACATCGAC
CCCTTCTTTG AAGAGACCAC GCTGTTCCTG CAGTGCGATG TGATCGAACC CGGTGATGGC
AAGGCCTACG ACCGCGATCC CCGCTCCGTG GCCAAGCGCG CCGAAGCCTA TCTGAAGGCA
TCGGGCCTGG GCGACACCGC CTACTTCGGA CCCGAACCCG AATTCTTCAT CTTCGACGGC
GTGCGCTGGA ACACCGAACC CGGCAGCACC TTCTACGAAA TCGAAGAGTA CGAAGCACCC
TGGAATTCGG GCGCCAAGTT CGAATCCGGC AACCGCGGCC ACCGTCCGCG CAACAAGGGC
GGCTACTTCC CCGTGCCCCC CGTGGACAGC ACCCAGGATC TGCGCGCCGA AATGGTGCTG
CTGCTCGAGC AACTGGGCAT TCCCGTCGAA GTGTTCCACC ACGAAGTGGC AGGCGCCGGC
CAGAACGAGA TCGGCACCCG CTTCAGCACC CTGGTGGAGC GTGCCGACTG GACACAGGTC
ATGAAGTACG TGATCTGGAA CGTGGCCAAC ACCTACGGCA AGACCGCCAC CTTCATGCCC
AAGCCCTATC CGGGCGACAA CGGCTCGGGC ATGCACGTGC ACCAGTCCGT CTGGAAGGAT
GGCAAGAACC TGTTCGCAGG TGACGGCTAC GCCGGCCTGT CCGACTTCGC GCTGTACTAC
ATCGGCGGCA TCATCAAGCA CGCCCGTGCC CTGAACGCCA TCACCAACCC CGGCACCAAC
AGCTACAAGC GCCTGGTGCC CGGCTTCGAG GCTCCGGTCA AGCTGGCCTA CTCGGCCAAG
AACCGCTCGG CATCGATCCG CATCCCCTAC GTGGCCAACC CCAAGGGCCG CCGCGTCGAG
GCACGCTTCC CCGATCCGCT GATGAACCCC TACCTGGGCT TCTCGGCCCT GCTGATGGCA
GGTCTGGACG GCGTGGAAAA CAAGATCCAT CCCGGCGAAG CCGCGACCAA GGATCTGTAC
CACCTGCCCC CGGAAGAGGA CAAGCTGGTG CCCACGGTCT GCCACAGCCT GGACCAGGCC
CTGGAAGCGC TGGACGCGGA CCGCTCGTTC CTGACCAAGG GCGGCGTGTT CTCGGACAGC
ATGCTCGATG CCTACATCGA GCTGAAGATG GGCGAAGTGA CCCGTTACCG TCAGGCCGTG
CATCCGGTCG AGTACGACAT GTACTTCTCG CTGTAA
 
Protein sequence
MAKTVADVLN MVKENEVKFV DLRFTDTRGK EQHVTVPVSH FDEDKFTSGH AFDGSSVAGW 
KGIEASDMQL MPDPATANID PFFEETTLFL QCDVIEPGDG KAYDRDPRSV AKRAEAYLKA
SGLGDTAYFG PEPEFFIFDG VRWNTEPGST FYEIEEYEAP WNSGAKFESG NRGHRPRNKG
GYFPVPPVDS TQDLRAEMVL LLEQLGIPVE VFHHEVAGAG QNEIGTRFST LVERADWTQV
MKYVIWNVAN TYGKTATFMP KPYPGDNGSG MHVHQSVWKD GKNLFAGDGY AGLSDFALYY
IGGIIKHARA LNAITNPGTN SYKRLVPGFE APVKLAYSAK NRSASIRIPY VANPKGRRVE
ARFPDPLMNP YLGFSALLMA GLDGVENKIH PGEAATKDLY HLPPEEDKLV PTVCHSLDQA
LEALDADRSF LTKGGVFSDS MLDAYIELKM GEVTRYRQAV HPVEYDMYFS L