| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5000 |
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| Symbol | |
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| ID | 5750611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5535846 |
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| End bp | 5536922 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300124 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001566014 |
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| Protein GI | 160900432 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGG ACGACCGGCC GGCGCCCCCG GCCTCCTATC AGGCGCTTGA CCTGCTGTGC
ACGCTGATGA CCGTGCTCGA CGAGCAGGGT GCCGTGCTTT TCGCCAACGC AGCCCTTGAA
AACGCACTGG GCCTGTCGCG CCGCATGCTC GAAGGCAGCG AGCTGGCGGC CTGCTTCACC
GAGCCTGCCT TGCTGGACAA GGCCTTGCGT GGCGCCCAGG ACAACGACTT CGCGGCCCTG
CGCTTCGAGG CCAGCCTGCA CCGCGTGGGC GGCGATGCGC TGCCCGTGCA CGTCACGGTC
TCGCTGGCCG AGCGGCCCGG CCATGTGCTG GTCGAGTTCT GGCCGCTGGA GCAGCAGGCC
CGCCAGGACC GCGAGGAGCG GCTGCGCGAG CAGGCCCAGG CACACAAGGA GCTGATCCGC
AACCTGGCCC ACGAGATCAA GAACCCGCTG GGCGGCATCC GTGGCGCAGC CCAGCTGCTG
CAGATGGATC TGGACGCACC CGAGCTGCGC GAGTACACCG AAGTCATCAT CCACGAGGCC
GACCGGCTGC AGGCGCTGGT GGATCGGCTG CTGGCGCCGC ACCGCCATCC GCATGAGGTC
GGTGACGTCA ACATCCACGA AGTCTGCGAG CGCGTGCGCT CGCTGGTGCT GGTCGAGCAC
CCTGCCGGGC TGACCATCAC GCGCGACTAC GACATCTCCA TCCCGGAGTT CCGGGGCGAC
AGCGCCCAGC TGATCCAGGC CGTGCTCAAC ATCGTCCAGA ACGCCGCGCA GGCGCTGCAG
GAGCGCATTG CGGCTGGTGA TGCCGAGATC ATTTTGCGAA CGCGTGTGGC CCGGCAGGTA
ACTTTTGGTC GCCAGCGCTA TCGGTTGGCA TTGGAATTGC ATGTGATCGA CAACGGGCCA
GGCGTTCCCG ATGCCATCAA GGAGCGGATC TTCTATCCGC TGGTATCGGG AAGGGATGGC
GGTTCGGGAC TGGGGCTGAC GCTGGCGCAG ACCTTCGTGC AGCGCCACCA GGGGCTGATC
GAATGTGAAA GCCAGCCGGG ACGCACGGAT TTCCGCATCC TCATTCCCCT GCCTTGA
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| Protein sequence | MIQDDRPAPP ASYQALDLLC TLMTVLDEQG AVLFANAALE NALGLSRRML EGSELAACFT
EPALLDKALR GAQDNDFAAL RFEASLHRVG GDALPVHVTV SLAERPGHVL VEFWPLEQQA
RQDREERLRE QAQAHKELIR NLAHEIKNPL GGIRGAAQLL QMDLDAPELR EYTEVIIHEA
DRLQALVDRL LAPHRHPHEV GDVNIHEVCE RVRSLVLVEH PAGLTITRDY DISIPEFRGD
SAQLIQAVLN IVQNAAQALQ ERIAAGDAEI ILRTRVARQV TFGRQRYRLA LELHVIDNGP
GVPDAIKERI FYPLVSGRDG GSGLGLTLAQ TFVQRHQGLI ECESQPGRTD FRILIPLP
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