| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4999 |
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| Symbol | |
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| ID | 5750610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5534229 |
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| End bp | 5535800 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300123 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001566013 |
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| Protein GI | 160900431 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGA TCTGGATCGT GGATGATGAC CCTTCCATCC GCTTCGTGCT GGAAAAGGCA
CTGGGCAGGG AAGGCTGGGC AACGCGCAGC TTCATCCAGG CGCGCGATGT GCTCACGGCA
CTGTCCGATG TCGATGCCGG CGACCCGGCG CGCCAGCCAC CCCAGGTGCT GGTGAGCGAC
ATCCGCATGC CCGGCGGCTC GGGGCTGGAG CTGCTCGAGC AGATCCGCGC CCAGCAGCCG
GGCCTGCCCG TCATCATCAT GACCGCGTAC TCCGACCTGG ACAGTGCCGT CTCGGCCTTC
CAGCGCGGAG CCTTCGAATA CCTGCCCAAA CCCTTCGACC TGCCCAAGGC CGTGGAACTC
ATCCGGCGCG CCGTCGAGGA AAGCCTGCGC GAGGATGTGG CGGAGGCCCA GGCCCCGCTG
CAGGCCGAGA TGCTGGGCCA GGCGCCTGCC ATGCAGGACG TGTTCCGTGC CATCGGCCGG
CTCAGCCAGA GCCAGGTCAC GGTGCTGATC ACGGGCGAGT CGGGCTCGGG CAAGGAGCTG
GTGGCGCGCG CGCTGCACAA GCACTCGCCC GTGGCGGGCG GCCCCTTCGT GGCCATCAAC
ACCGCCGCCA TCCCCAAGGA CCTGCTGGAG TCCGAACTGT TCGGCCACGA GCGCGGCGCC
TTCACTGGCG CCCAGACGCA ACGGCGCGGA CGCTTCGAGC AGGCCGAGGG CGGCACGCTC
TTTCTCGATG AAATCGGCGA CATGCCCTTC GACCTGCAGA CGCGCCTGCT GCGTGTGCTG
TCGGACGGGC ACTTCTACCG CGTGGGCGGC CACCAGGCCG TCAAGGCCCA TGTGCGCGTC
ATCGCCGCCA CCCACCAGGA CCTGGAGCAG CGCGTGCGCA ACGGCGGCTT CCGCGAGGAT
CTGTTCCACC GCCTCAACGT CATCCGCCTG CGCCTGCCCG CGCTGCGCGA GCGCAATGAA
GACGTGCCCA TGCTGGCTCG CCACTTCCTG CAGCAAAGCG CGCGGCAACT GGGCGTGGAG
CCCAAGCGCA TGGGGGTCGA TGCCATGCAG CGGCTGCAGA CCTTCGCCTT CCCCGGCAAC
GTGCGACAGC TGGAGAACAT CTGCCACTGG CTGACCGTCA TGGCCCCTGC CCAGGTCATC
TCGGTCAAGG ACCTGCCCCC CGAGGTGCTG GGCGAAGCCG CCCCGCCCGT GGGCGGGGGC
AACGGCGGCG TGCCTGCACC GGCCGCGCTG CCGCATGCGC CGGCACCGCT GGCGGAAGAG
GGCCTTGGCC GACTGGCCGT GCCCGTGTCC GCGCTGGCCC CGCCGCATGA CACCGCCCTG
GCCGCTTCCG ACCTGGACTG GGTCCATCTG CTGGGGCAAC AGGCGCGCCA GCTGCTGGAG
CACACCCACG CCCAGGGGCA TGGTGAAGTC TGGGACCAGC TGTCCCGCCG CTTCGAGGCG
CAGCTGATCC GCTCGGCCCT GGCCGTCACC CACGGCCGCC GGGTCGAGGC CGCCCAGCGC
CTGGGCATTG GCCGCAACAC CATCACCCGC AAGCTGCAGG AGCTGGGCAT GGACGAGGAC
GCCTTCGAGT AA
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| Protein sequence | MKPIWIVDDD PSIRFVLEKA LGREGWATRS FIQARDVLTA LSDVDAGDPA RQPPQVLVSD
IRMPGGSGLE LLEQIRAQQP GLPVIIMTAY SDLDSAVSAF QRGAFEYLPK PFDLPKAVEL
IRRAVEESLR EDVAEAQAPL QAEMLGQAPA MQDVFRAIGR LSQSQVTVLI TGESGSGKEL
VARALHKHSP VAGGPFVAIN TAAIPKDLLE SELFGHERGA FTGAQTQRRG RFEQAEGGTL
FLDEIGDMPF DLQTRLLRVL SDGHFYRVGG HQAVKAHVRV IAATHQDLEQ RVRNGGFRED
LFHRLNVIRL RLPALRERNE DVPMLARHFL QQSARQLGVE PKRMGVDAMQ RLQTFAFPGN
VRQLENICHW LTVMAPAQVI SVKDLPPEVL GEAAPPVGGG NGGVPAPAAL PHAPAPLAEE
GLGRLAVPVS ALAPPHDTAL AASDLDWVHL LGQQARQLLE HTHAQGHGEV WDQLSRRFEA
QLIRSALAVT HGRRVEAAQR LGIGRNTITR KLQELGMDED AFE
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