Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4989 |
Symbol | |
ID | 5750600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5520351 |
End bp | 5520872 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641300113 |
Product | tail collar domain-containing protein |
Protein accession | YP_001566003 |
Protein GI | 160900421 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC CCTTTGTCGC CGAAATCCGC CTTGGCGGAT TCAACTTCGC ACCCAAGGGC TGGGCCTTTT GCGATGGTCG GCTCCTGCCG ATTTCTCAGA ATACGGCGCT GTTTTCCCTG CTGGGAACGG CATATGGTGG AGATGGCAAG TCCAGCTTCG CGCTTCCCGA CTTGCAGGGC CGCATGCCCA TGCACCCGGG CCAAGGACCT GGACTGTCAC CGCGCGATCT GGGCGAATCC GGCGGTGTTG AAACCGTGAC GCTGCAGGCA TCGGAAATTC CCGCCCACAA CCATCTGGCC CGAGCGGGCA CGCCTGCGGA TCCCGCTGTA GCAAGCCCGG CAGACGCCGT CCTGGGCACC GCACCGACGC GCCCCTACAT CGCGCCAGCC TCCAGCACCT CTGCGGTCAC CATGGCTCCC CCTCAAGCTG CGGGCGGCAG CCAGCCACAC AACAATCTTC CGCCCTACCT GGTCATGAAC TTCATCATCG CCTTGCAGGG CATCTTCCCC CCACGGAGCT GA
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Protein sequence | MSDPFVAEIR LGGFNFAPKG WAFCDGRLLP ISQNTALFSL LGTAYGGDGK SSFALPDLQG RMPMHPGQGP GLSPRDLGES GGVETVTLQA SEIPAHNHLA RAGTPADPAV ASPADAVLGT APTRPYIAPA SSTSAVTMAP PQAAGGSQPH NNLPPYLVMN FIIALQGIFP PRS
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