Gene Daci_4989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4989 
Symbol 
ID5750600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5520351 
End bp5520872 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID641300113 
Producttail collar domain-containing protein 
Protein accessionYP_001566003 
Protein GI160900421 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CCTTTGTCGC CGAAATCCGC CTTGGCGGAT TCAACTTCGC ACCCAAGGGC 
TGGGCCTTTT GCGATGGTCG GCTCCTGCCG ATTTCTCAGA ATACGGCGCT GTTTTCCCTG
CTGGGAACGG CATATGGTGG AGATGGCAAG TCCAGCTTCG CGCTTCCCGA CTTGCAGGGC
CGCATGCCCA TGCACCCGGG CCAAGGACCT GGACTGTCAC CGCGCGATCT GGGCGAATCC
GGCGGTGTTG AAACCGTGAC GCTGCAGGCA TCGGAAATTC CCGCCCACAA CCATCTGGCC
CGAGCGGGCA CGCCTGCGGA TCCCGCTGTA GCAAGCCCGG CAGACGCCGT CCTGGGCACC
GCACCGACGC GCCCCTACAT CGCGCCAGCC TCCAGCACCT CTGCGGTCAC CATGGCTCCC
CCTCAAGCTG CGGGCGGCAG CCAGCCACAC AACAATCTTC CGCCCTACCT GGTCATGAAC
TTCATCATCG CCTTGCAGGG CATCTTCCCC CCACGGAGCT GA
 
Protein sequence
MSDPFVAEIR LGGFNFAPKG WAFCDGRLLP ISQNTALFSL LGTAYGGDGK SSFALPDLQG 
RMPMHPGQGP GLSPRDLGES GGVETVTLQA SEIPAHNHLA RAGTPADPAV ASPADAVLGT
APTRPYIAPA SSTSAVTMAP PQAAGGSQPH NNLPPYLVMN FIIALQGIFP PRS