Gene Daci_4977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4977 
Symbol 
ID5750588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5510811 
End bp5511593 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID641300101 
Producthypothetical protein 
Protein accessionYP_001565991 
Protein GI160900409 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.589508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATT GGACCCATCC GACCGAATTC CGCCAGGAGG TGCGCGCCGG ACGCTTTCGC 
GGGCAGACGG CCGGGCAGTG CCCCGGCTAC ACCCAGGGCA ACCTGGCGAT ACTGCCGCGC
GAGTGCAGCG AGGAGTTCCT GCGCTTTGCC CGGCTGAATC CCAAGTCCTG CCCGCTGATC
GGCGTGACCG AGCCCGGCAG CAGCCGCGTG CCCGAGCTCG GCGATATCGA TCTGAAGACC
GACCTGCCCT CGTACTGGGT GTTTCGCGAT GGTCACAGGG CAGAGCAGGT GAATGACCTC
ACGGACCTGT GGCGCGACGA CCTGGTGGGC TTCGTCATCG GCTGCTCCTA TTCCTTCGAG
GACGCGCTGC GCGACGCCGG CGTGCCCGTG CGCCACATCG ACGAGGGCCG GGGCGCTCCC
ATGTTCATCA CCGACATTGC CAACGGCCAG GCGGGCCGGT TCGGAGGCCG GATGGTGGTC
AGCATGCGGC CCATGACGGC CGCCCAGGCC ATCCGTGCGA TCCAGGTGAC TTCGCGCTTT
CCCAGCGTGC ATGGGGCGCC CGTGCACCTG GGCGACCCTG CGCAGATCGG CATTGCCGAT
ATCGAGCGGC CGGACTTCGG CGAGCCCATG GCGCTCAAAC CCGGGGAGAT CCCCGTGTTC
TGGGCCTGCG GCGTGACGCC CCAGCAGGCC ATCCGCTCGG CGGCCCTGCC ATTCGCCATC
ACGCACGAGC CGGGCCACAT GCTGGTGACG GAGTTGCGCA ACAGCCATCT GGCCGCGTTC
TGA
 
Protein sequence
MTHWTHPTEF RQEVRAGRFR GQTAGQCPGY TQGNLAILPR ECSEEFLRFA RLNPKSCPLI 
GVTEPGSSRV PELGDIDLKT DLPSYWVFRD GHRAEQVNDL TDLWRDDLVG FVIGCSYSFE
DALRDAGVPV RHIDEGRGAP MFITDIANGQ AGRFGGRMVV SMRPMTAAQA IRAIQVTSRF
PSVHGAPVHL GDPAQIGIAD IERPDFGEPM ALKPGEIPVF WACGVTPQQA IRSAALPFAI
THEPGHMLVT ELRNSHLAAF