Gene Daci_4968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4968 
Symbol 
ID5750579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5499431 
End bp5500861 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content68% 
IMG OID641300092 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001565982 
Protein GI160900400 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC TGCTTGAACG CCTGCGCCAG ATCGTCGGCG AAGCCCATGT CCTCACCGAG 
GGCGACCTCG TCGCCTATGA ACAGGACTGG CGCCGCCGCG TGCGCGGCAA GTCCCTGGCC
GTGGTGCGCC CGGCCAGCAC GGCCGAGGTG GCCGCCGTGG TGCGCGAATG CGCGGCCGCA
GGCACCAGCA TCATTCCCCA GGGCGGCAAC ACCGGCCTGT CGGTGGGCTC CACGCCGGAC
GACAGCGGCA CGCAGGTCGT GCTCAGCCTC ACGCGCCTGA ATGCCGTGCG CCACATCGAC
CGCGACAACC TGAGCTTCAC CGTCGAGGCC GGCTGCATCC TGCAAAGCCT GCAGGAGCTT
GCCGAGAAAG AGGGCCTGCT GTTCCCGCTG TCGCTGGCCG CCGAAGGCAG CTGCACCATT
GGCGGCAACC TGGGCACGAA CGCGGGCGGC ACCCAGGTGG TGCGCTACGG CAACACGCGC
GAGCTGTGCC TGGGCCTGGA AGTGGTCACG CCGCAGGGCG AGGTCTGGGA CGGCCTCAAG
GGCCTGCGCA AGGACAACAC CGGCTACGAC CTGCGCGACC TGTTCATCGG CAGCGAAGGC
ACGCTGGGCA TCATCACCGC CGCCACCATG AAGCTGTTCC CCCAGCCTGC GGCCCAGCTC
ACGGCCTTTG CCGCCGTGCC CTCCATGGAA GCGGCCGTGC GCCTGCTGGG CATGGCGCAC
CAGTACCTGG GCGCGGGCCT GACGGGCTTC GAGGTCATGG GCCAGTTCGC GCTGTCCCTG
GTGATCAAGC ACATGCCCCA GCTGCGCGTG CCCTTTGCGG GCCTGGACGG CGCGCCGCCC
TATTACGTGC TGGTCGAGAA CTCGGACAGC GAGTCCGAGC AGCATGCGCG CGAGCGTTTC
GAGGCGTTGC TGGAACTGGC CTTCGAGGAC GGCTGCGTGC TCGACGCCGT GGTGGCCGAA
AGCCTGTCGC AGGCCCATGA GCTGTGGCAT ATCCGCGAGA GCATTCCCCT GGCCCAGGCC
GAGGAAGGCC TGAACATCAA GCACGACATC TCCATTGCGG CATCGCGCAT TCCCGCCTTC
GTCGAACACA CCGATGCCGT GCTGCAGCGC GAGATCCCGG GTGTGCGCCT GGTCAACTTC
GGCCACCTGG GCGACGGCAA CCTGCACTAC AACGTGCAGG CGCCCGTGGG CGGCGACGCC
AAGGCCTTCC TCAATGAGCG CGAGCACCTG GTCAACCACC TGGTCTACGA GGCCGTGGCC
GAATTCGGCG GCTCGTTCTC TGCCGAGCAT GGCGTGGGCG CGCTCAAGGT GGACAAGCTG
CAGAAGTACC AGTCGCCCGT GGCGCTGGGC ATGATGCGCG CCATCAAGCA GGCGCTGGAC
CCGCAGGGAC TGATGAACCC GGGCTGCATC CTGCCGCGAC AAGCCTCCTG A
 
Protein sequence
MTALLERLRQ IVGEAHVLTE GDLVAYEQDW RRRVRGKSLA VVRPASTAEV AAVVRECAAA 
GTSIIPQGGN TGLSVGSTPD DSGTQVVLSL TRLNAVRHID RDNLSFTVEA GCILQSLQEL
AEKEGLLFPL SLAAEGSCTI GGNLGTNAGG TQVVRYGNTR ELCLGLEVVT PQGEVWDGLK
GLRKDNTGYD LRDLFIGSEG TLGIITAATM KLFPQPAAQL TAFAAVPSME AAVRLLGMAH
QYLGAGLTGF EVMGQFALSL VIKHMPQLRV PFAGLDGAPP YYVLVENSDS ESEQHARERF
EALLELAFED GCVLDAVVAE SLSQAHELWH IRESIPLAQA EEGLNIKHDI SIAASRIPAF
VEHTDAVLQR EIPGVRLVNF GHLGDGNLHY NVQAPVGGDA KAFLNEREHL VNHLVYEAVA
EFGGSFSAEH GVGALKVDKL QKYQSPVALG MMRAIKQALD PQGLMNPGCI LPRQAS