Gene Daci_4956 details

Gene Information

• Locus tag: Daci_4956
• Symbol: nrdR
• ID: 5750567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Delftia acidovorans SPH-1
• Kingdom: Bacteria
• Replicon accession: NC_010002
• Strand: +
• Start bp: 5486848
• End bp: 5487303
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641300080
• Product: transcriptional regulator NrdR
• Protein accession: YP_001565970
• Protein GI: 160900388
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGTGCC CGTTCTGCAG CCATCCGGAC ACCCAGGTCG TGGAGACCCG TGAGGCCGAG 
GATGGGGGCT TCATCCGCCG CCGCCGCCAG TGCGGCGGCT GCGACAAGCG CTTCACCACG 
TACGAGCGGC CCGAGGTCAG CTTTCCCGCC ATCGTCAAGA AGGACGGGCG GCGCATCGAG 
TACGAGCGCG CCAAGCTGCT GGGCTCGTTC AAGATCGCGC TGCGCAAGCG CCCCGTGAGC 
ACAGAGCAGA TCGATGCCGC CATCGAGCGC ATCGAGGAAC GGCTGCGCAA CCTGGGCGAG 
CGCGAAGTGC TCTCCAGCCG CCTGGGCGAG ATGGTGATGC GCGAGCTCAA GCTGCTCGAC 
AAGGTCGGCT ACATCCGCTA CGCCAGCGTC TACCGCAGTT TCGAGGATGT GGACGATTTC 
AAGAACGTCA TGGATGAGGT GCGCAATCCC GGCTGA 

 

Protein sequence

MKCPFCSHPD TQVVETREAE DGGFIRRRRQ CGGCDKRFTT YERPEVSFPA IVKKDGRRIE 
YERAKLLGSF KIALRKRPVS TEQIDAAIER IEERLRNLGE REVLSSRLGE MVMRELKLLD 
KVGYIRYASV YRSFEDVDDF KNVMDEVRNP G