| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4953 |
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| Symbol | |
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| ID | 5750564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5479734 |
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| End bp | 5483579 |
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| Gene Length | 3846 bp |
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| Protein Length | 1281 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300077 |
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| Product | hypothetical protein |
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| Protein accession | YP_001565967 |
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| Protein GI | 160900385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGTA CTAGTTACCA GAGCCCCATG CAATCTCTCT TCAAGCACCG CTGGCTGCGC
AGGCTGGCCA TCGCCCTTGT GGCGTTCCTT TTGCTGTGGC TGCTGCTGTG GGCGCTGGTG
CCCGTTGTGG CCAAGAGTCA ACTGGAAAAG CAGGCATCGG CCAAGCTGGG CCGTCAGGTC
CGTGTGGGTG CAGTGGAGTT CCGGCCCTGG TCGCTGGAGC TGACCCTGCG GGACCTGAGC
ATTGCCAGGA GCCAGGCGGA AGGCGCGGCG CCGGAGTCCG TGCCGTCTTC ATCTTCGTCC
CCCCAGCTTC AGATCGACCG CATCTATGTC AATGCCAGTA TCCAGTCGCT GTTTCGGCTG
GCGCCGGTGC TGGATGCCAT CGAGGTCGAT GCGCCGGTGC TGCGCCTGAC CCAGCAGAGC
CTGGGGCATT TCGATGTGGA CGATGTGCTG GCCAGGCTGG CCGAACCCGG CGACACGCCG
CCCTCCAAAC CCGTGGGCTT TGCGCTGTAC AACATTGCGC TGCGCGACGG CCGCGTGGAA
TTGCAGGACG AGGTCCAGCG GCGCCAGCAC ATGCTCGAGC AGTTGCAGCT GCGCCTGCCC
TTCATCAGCA ACCTGGAGTC CAAGCGCGAG ATCAAGGTGC TCCCGCACCT GTCCTTCGCG
CTCAACGGCA GCCGGTTTGA ATCCAGCGCC CAGAGCACGC CCTTCACCGA GCAGCGCCAG
ACCGCTGTCG ATCTGAGCTT GCAGGGCGTG GACCTGACAC CTTATTTGGG CTATGTGCCC
GTCACCGCGC CTGTCAAGCC GCGTTCCGGC GTGCTGGATG CCAACCTGCA CATCTCCTTT
GAGCAGGCCG AGCAGGCCGT GGTCCGCATC ACCGGGGAGG TCAGCCTGTC CGGCGCCGAG
CTGCACGACC GCGACGGCGT CCCCCTGCTG CGCTTCGAGC GCCTGGCCGC CGTGCTCAAG
AACGTGCAGC CGCTGCAGTC GGTTGCGGAG CTGGAGTCCG TGCAGTGGAG CGCTCCCGAG
ATTTTTGCGG CCCGCGATGC GCAAGGCCGC ATCAATTGGA CGGCGATGGG GGGTGCTTCC
TCCCCGGATG CCAGGCCGGC AGCGGAAAAG CCTGCCTCCG ACGCGCCCCA GCCGTGGAAG
GTCAGCCTGG ACAGGCTGTC CGTTGCCCAT GCCACGGTGC ATTGGCGCGA TGCCGCTCCC
GACGCTGGAA AGTCGGGCGC TGCGCTGCAG GCGCGCGAGC TGTCGTTGCA GGTGCGCGAT
ATCCGCTGGC CCCTGGAGCA ACCGCTGCAG CTTGCTGCCA GCATGCAGGT GCAGCCCGAA
TCGGCGGGGG AGGGGGCGAA ACCTGCCGAG TTGCAGCTGA GCGGGGCCTT GACCGACAAG
CAGGGCCAAC TGGCCATCTC CGCGCGGCAA TTGCCGCTGC AACTGGCAGC ACCGTACCTG
TCCGCCCATA TCAAACCCGA GCTGACGGGC CTGTTGAGCA CCGACGCAGG CCTGGGCTGG
AACGGTTCCG CCATGGTGGT TCAGGTGGCC GGGCTGGGCG TGGAGCAGTT GAGCCTCAAG
GACAAGGCCG CGCCCGTCGA CATCGCGCAC CTGCAGCTGG AGCAGGTGCA GGTCAATCTG
GCCAGCCAGC AGGTCTCCGT TGGCCGCCTG GCACTGCAAA AGCCGCAACT GGCCGTGTTG
CGCGATGCCC AGGGCCGGTG GATGTACGAG CAATGGCTGC CGCCCGCCTC CTCGGCACCC
GCATCGCAGG ACGCCGGCAA GGACAAGTCC CGGCCCTGGG GGCTGAAGCT GCAGGCGGTG
GAGGTCGATG GCGGCGCCAT TGCGCTGCGT GACGAAGCGC CCGTGCGCAA CGCGGATTCC
GCGCGCACCG TGTCGCTGGA CCTGGGTTCA CTGCGCCTTC GCATGGGCGC CATCGAGCCG
CTGGCCGCCA AATCCGCGCC CACGCCGCTG GAGCTGTCCG CCCAGGTCGG CTCGGGCCGG
CGTGTCCAGG CGGGCTCGCT GAGCCTGCGG GGGGACCTGG GACTGGCGCC GCTGTCGCTT
CAGGGCAGGT TGCAGGCGCG CAGCCTGCCG CTGCATGCAC TGGAGCCCTA CTTTGCCGAC
ATGCTCAATG TGGAGTTGGT GCGTGCCGAC GGCAATTTCC TCGGACAACT GCGCTTTGTC
AGCCAACCGG CCGGCCCCGA GCTGGCGGTG CAGGGGGATG TCGAGCTCGT GGATCTGCGC
ATGCGCTCCG CGCTGGCCTC TCCCGTGCAA GCGGCGGGCG AGGCCGCAGG GCAGGGCGCG
CCACGCACGG CGGCAGGTGC CGTGGCTGCC GTGCTCAGCG AGTCCACGGC CGACCGGGCC
AAGGCCCAGT CGGTTGCCTT GGGACTCGGC CTGCGCGATG AACTGCTGGC CTGGAAGACG
CTGGCCGTGC GCGGCCTGGA CCTGCAGATG CAGCCCGCCC AGCCGCTGCG CCTGAGCGTG
CGCGAGACGG CGCTCAGCGA CTTCTTTGCG CGCGTCATCG TGCAGCGCAA CGGGCGCATC
AACCTGCAGG ACATCGTCAA ATCGGCGAAG TCCCAGCAGT CCCTGGAGCA GAACGCCACG
CCGGCTGCAG AGGGCACGGC GGCTTCCGCC GAACCGGCGC CGCCGCAGGC TGCCTCCGGG
CCCGCGCCCG TCATCAAGAT CGGGCCGATT GTGCTGACGG GCGGCAGGGT CCAGTTCTCC
GACTACTTCA TCCAGCCCAA CTACTCGGCC GACCTCAGCG AGCTGGCGGG CCGCCTGAGC
GCCTTCTCGT CCGAGCAGCC TGCCAGCCAG CAGGCGCCGC AACTGGCGGA TGTGGAACTG
CGCGGCCGCG CCCAGGGCAC GGCTTCGCTG GAGATCACCG GCCAGGTCAA TCCGCTGGCC
AAGCCGCTGG CCCTGGACAT ACGTGCCCAG ATGCGCGACC TGGAACTGCC CCCGCTGTCC
CCGTACTCCA TCAAGTACGC GGGCCACGGG ATCGAGCGCG GCAAGCTCAG CATGGACGTC
AACTACAACA TCGAGCCCGA TGGCCAGCTC ACGGCGCGCA ACAAGCTGGT GCTGCATCAG
CTCACTTTCG GCGAAGCCGT CGAAGGCGCG CCCGCCTCGC TGCCCGTGCG CCTGGCGGTG
GCGCTGTTGG CTGACCGCAA CGGAGTCATC GACCTGGACC TGCCGGTCAG CGGCTCGCTC
AACGACCCGC AATTCCGGCT GGCGCCGGTC ATCTTCAAGA TCATTGGCAA CCTGATCATG
AAGGCCATCA CCTCGCCTTT CTCGCTGCTG TCGGGCGCTT TTGGGGGCGG CAGCGAATCG
GGAGTGGTGG CCTTTGCCCC GGGGCGTGCC CAGATCGACG GCAAGGCCCG CGAGAGCCTG
GACAAGGTGG TTGCCTCCCT CAAGGAGCGC CCGGCCCTCA AGCTCACCGT GATCGGTGAG
GCGCGCGAGG CGCAGGACAA AGAGGCCTGG AAGCAGGCGG AGCTCGATCG CCTGCTGCTC
GCCCAGAAAC GCCGCCAGGT GCTGCGCGAC GGCAAGTCGG CAGAGTCCGT GACCGAGTTG
CCCGCCTCCG AAGTGCCGGC CTTGACCAAG GCGCTGTACA GTCGCGCCGA CTTTGCCAAG
CCGCGCAATG TCATCGGCAT GGCCAAGGAC CTGCCCACCG AACAGATGCG CAGTCTGCTG
CTGGAGCAGA TTGCCGTGCC CGACGACGCC ATGCGCGAAC TGGCGCTGGC CCGCGCCGTG
GCCGTGCGCG ACTACCTTGC CCAGCAGCAG TTGCCGCTTG AACGCCTGTT TCTGGGGGCT
CCAAAACTGG ACTCCGACGA CCAGGAATGG AGTCCGCGCG CCCAGCTCAG CCTGTCCACG
CAGTAG
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| Protein sequence | MGCTSYQSPM QSLFKHRWLR RLAIALVAFL LLWLLLWALV PVVAKSQLEK QASAKLGRQV
RVGAVEFRPW SLELTLRDLS IARSQAEGAA PESVPSSSSS PQLQIDRIYV NASIQSLFRL
APVLDAIEVD APVLRLTQQS LGHFDVDDVL ARLAEPGDTP PSKPVGFALY NIALRDGRVE
LQDEVQRRQH MLEQLQLRLP FISNLESKRE IKVLPHLSFA LNGSRFESSA QSTPFTEQRQ
TAVDLSLQGV DLTPYLGYVP VTAPVKPRSG VLDANLHISF EQAEQAVVRI TGEVSLSGAE
LHDRDGVPLL RFERLAAVLK NVQPLQSVAE LESVQWSAPE IFAARDAQGR INWTAMGGAS
SPDARPAAEK PASDAPQPWK VSLDRLSVAH ATVHWRDAAP DAGKSGAALQ ARELSLQVRD
IRWPLEQPLQ LAASMQVQPE SAGEGAKPAE LQLSGALTDK QGQLAISARQ LPLQLAAPYL
SAHIKPELTG LLSTDAGLGW NGSAMVVQVA GLGVEQLSLK DKAAPVDIAH LQLEQVQVNL
ASQQVSVGRL ALQKPQLAVL RDAQGRWMYE QWLPPASSAP ASQDAGKDKS RPWGLKLQAV
EVDGGAIALR DEAPVRNADS ARTVSLDLGS LRLRMGAIEP LAAKSAPTPL ELSAQVGSGR
RVQAGSLSLR GDLGLAPLSL QGRLQARSLP LHALEPYFAD MLNVELVRAD GNFLGQLRFV
SQPAGPELAV QGDVELVDLR MRSALASPVQ AAGEAAGQGA PRTAAGAVAA VLSESTADRA
KAQSVALGLG LRDELLAWKT LAVRGLDLQM QPAQPLRLSV RETALSDFFA RVIVQRNGRI
NLQDIVKSAK SQQSLEQNAT PAAEGTAASA EPAPPQAASG PAPVIKIGPI VLTGGRVQFS
DYFIQPNYSA DLSELAGRLS AFSSEQPASQ QAPQLADVEL RGRAQGTASL EITGQVNPLA
KPLALDIRAQ MRDLELPPLS PYSIKYAGHG IERGKLSMDV NYNIEPDGQL TARNKLVLHQ
LTFGEAVEGA PASLPVRLAV ALLADRNGVI DLDLPVSGSL NDPQFRLAPV IFKIIGNLIM
KAITSPFSLL SGAFGGGSES GVVAFAPGRA QIDGKARESL DKVVASLKER PALKLTVIGE
AREAQDKEAW KQAELDRLLL AQKRRQVLRD GKSAESVTEL PASEVPALTK ALYSRADFAK
PRNVIGMAKD LPTEQMRSLL LEQIAVPDDA MRELALARAV AVRDYLAQQQ LPLERLFLGA
PKLDSDDQEW SPRAQLSLST Q
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