| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4952 |
|---|
| Symbol | |
|---|
| ID | 5750563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5476952 |
|---|
| End bp | 5479606 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641300076 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565966 |
|---|
| Protein GI | 160900384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTC TTTCCCCCCG CAGCACCATG TCCGATGCAC CTGAAGTGAG CCCTGCTTCT
GCCAAGAATC CCGAACAACA CCCCTTGGAT GTGCTCACGG GCGGTGCCTT CTCCGCCGAA
ACCTCGGGTG ATCGCGCCGC GCGCATCCGC GACTGGCTGG CAACCCAGCC TTCGGTCGAG
CAATTGCAGG ACGTCCTCAA GGAACTGAGC GCGCGCGACA AGGGCGCGGC CCGTGCCGTG
CGTGAGCGCC TGGACGAGAT CCGCCGCACC AAGGACCAGG AAAAGATCGC AGTGGAGTGG
GCTGAAAAGG CCCAGGCGCT GCTGGTCGCA TCGCCCTTCA ATGCCGCCGA CGCCATCGCC
TGGCAGCGCG ACGCCGCCAA GGCGGGCGCA CCGCTGTCGC GTGAACCTCT GTCGCAGCAC
AAGGCCCAGC TGGCCGAGCG TGTCAAGGCC ATCGAAGAGC TGCAGCACCG CGTGCAGGTC
CAGCGCGAAG TGGCCGTTTT GCTGGCCCAG CGCATCGAGG TCCTGTCCAC CAAGCCCTGG
CGCGATGCCC AGGCTGTGCT CGACAACCTG CGCGCCGACG TGGCCCGTTG GCAGGAGCAG
GCCGGCGAAC TGACTGGCGA TGACAACTGG GCCAGCGTGG ACGGACGTTT CCCGCCCCAG
CTGGAAGCCG CCAGCGCACA GCTGATCCTG GTCTGGGATG CCTTCCAGTC TGCACTGGCG
CTCACCGAAG CTGCCGCCGC CGACGAAGCC GCTCCGCTGC CCACCGTGCC CGTGTGGGCC
GATGAGCTGC GCGTGGCGCG TGGCCTGCCT CCCGAGGCAG CGGCTGCCGA GCCGTCCAAG
CCCGCTCCCG CTGCCCGCAG CGCAGCCCAG CCCAAGGCGA AGACATCGCC TGAGCAAGTG
GCTGCCGCCA GCAGTGCACT GACCCAGGCG CTGGAGCAGC TCCAGGCCGA GACGGCTGCA
GGCGAAAGCA AGGCGGGTTC CGCCGCCGTG CAGGCCGTGC GCGCCGCCAT CAAGGCCCAT
GGCCGCCTGG TGGACGATGC ACTGGTCACC AAGGTGCATG AGGCCCTTCT GGCAGCTGGC
GAGTCCGAAG GCTGGCCGCG CCAGAACGCC GACAAGCTGC GCGAGGAACT GGTTGCCAAG
GCCGAAGCCC TGCTGAATCG CCCGGAAGGC CAGGCGCTGG GTGGCCGCAA GATCCAGGAA
TCGCTGCGCA GCCTGCGCGA GCAATGGAAG CTGGCCGATC AGGGCAGCGC GGCCAACCAC
GCACTGTGGA AGAAGTTTGA CGAAGCCTGC AACACGGCCC ACAAGGTGGT CGAGTCCTGG
CACGACAAGC TGCGCACCGA AACCACCCAG TCCAAGGCAC AGCGCCTGGC GCTGATCGAA
GAGATCAAGG CCTGGGCGGC ACAGCAGTCC GCCAGCGAAG ATCTCAAGGG TGCGGCGCGT
GCACTGCGCC AGTTCGCTGA ACGTTGGCGT GAAAGCGGGC ACATCGGCGA GAAGCTGTTT
GCCGAACTGC AACCCCAGTT CAAGCAGGCC ATGGCCCTGG CCGAGGCTCC GTTGCATGCC
GCGCAAAAGG CCAGCCTGCA GCGTCGCCAC GCCATGATCG ACGAAGCCAC CGCTCTGGGC
GCAGCGCCCA ACCTGCGCAT CGACGCCGTC AAGGCCCTGC AGCAGCGCTG GCAGGCCGAG
GCGCAGGCCG TGCCTCTGGA TCGCAAGCAT GAGCAAAAGC TCTGGGATGC CTTCCGCAAG
CCGCTGGACG AAGCCTTCAA CCGCAAGGGC ACCGAGCGGG GCCCCCGCGC CGCAGCCGTG
GCACTCAGCG ACCATGATCG CCGCGTGCTG GAAGCGTCGC AGGCCGTGGA AGCTGCCAAC
ACCTCGGGTG ACGTGCAGCA AATCCGCGCT GCGGTGGAGG CCCTGGAGCA AGCGCTGCGT
GGCCGTGCCG ATGCTTCCGT GAATGCGGCC CAGCCAGCAC AGGAACCTGC CGCTGCTGCA
GCGGGTTCGG AAGAGTCCGA AGCCAAGCCG GTGCCGGTGC GCCCCGTGGT TGCCGTGCGC
GGCGACGATC GTCCTGGTAT GAAGAAGGAA GAGGGCGGTG CACGCGCTGC CCGTCCTGGC
GACCGCCGCG ATGGTGGCCG TGGTCGCGAC GGCCGGGATG GCCGAGACAG CCGCGACAGT
GGCCGTTTCA GCCGCGAGCC GCGCGAGGAG CGCGGACCGC GTCTGGCGGA CCCCGCCTTC
CGCGCCCAGC GTGAAGCCTT GGAACATGCC CAGGACGCCC TGCGCAAGCT CGCGGCCCAG
GCCCATGGTG AGGCACTGAC CCAGTTGATG GCGGCGTGGG AGTCGCGTGA TGCTTCCCAG
ATGCCGGCTG CACAGCAGCT TGGCAGCCGC GTGTCTGCAC AAGTGCGCAG TGCCTGGTCG
CAGGCCCTCG GCCAGGCTCC CAAGGGAGAC GCGGGCGAAG CCCTGCTGCG CCTTGAAATG
GCCGCCGACG TTCCCACACC TGCGGAACAT CTGAGCGCCC GCCGTGCCCT GCAGCTGCAG
CTGCTGACGC GCCGCAACGA TCCTGCTCCG CAGGAAACCT GGGGCAACGA TGCCGCCCGG
GTGCTGGCAT CGCCGCGCGA TGATGCCAGC GCGCGCCGTC TGCAGAACGT GCTCAAGCAA
CTGCTGCGCA AGTGA
|
|---|
| Protein sequence | MSSLSPRSTM SDAPEVSPAS AKNPEQHPLD VLTGGAFSAE TSGDRAARIR DWLATQPSVE
QLQDVLKELS ARDKGAARAV RERLDEIRRT KDQEKIAVEW AEKAQALLVA SPFNAADAIA
WQRDAAKAGA PLSREPLSQH KAQLAERVKA IEELQHRVQV QREVAVLLAQ RIEVLSTKPW
RDAQAVLDNL RADVARWQEQ AGELTGDDNW ASVDGRFPPQ LEAASAQLIL VWDAFQSALA
LTEAAAADEA APLPTVPVWA DELRVARGLP PEAAAAEPSK PAPAARSAAQ PKAKTSPEQV
AAASSALTQA LEQLQAETAA GESKAGSAAV QAVRAAIKAH GRLVDDALVT KVHEALLAAG
ESEGWPRQNA DKLREELVAK AEALLNRPEG QALGGRKIQE SLRSLREQWK LADQGSAANH
ALWKKFDEAC NTAHKVVESW HDKLRTETTQ SKAQRLALIE EIKAWAAQQS ASEDLKGAAR
ALRQFAERWR ESGHIGEKLF AELQPQFKQA MALAEAPLHA AQKASLQRRH AMIDEATALG
AAPNLRIDAV KALQQRWQAE AQAVPLDRKH EQKLWDAFRK PLDEAFNRKG TERGPRAAAV
ALSDHDRRVL EASQAVEAAN TSGDVQQIRA AVEALEQALR GRADASVNAA QPAQEPAAAA
AGSEESEAKP VPVRPVVAVR GDDRPGMKKE EGGARAARPG DRRDGGRGRD GRDGRDSRDS
GRFSREPREE RGPRLADPAF RAQREALEHA QDALRKLAAQ AHGEALTQLM AAWESRDASQ
MPAAQQLGSR VSAQVRSAWS QALGQAPKGD AGEALLRLEM AADVPTPAEH LSARRALQLQ
LLTRRNDPAP QETWGNDAAR VLASPRDDAS ARRLQNVLKQ LLRK
|
|---|
| |