| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4948 |
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| Symbol | rpsB |
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| ID | 5750555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5469366 |
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| End bp | 5470118 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641300068 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001565962 |
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| Protein GI | 160900380 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.532648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGTCA CTATGCGCGA GATGCTGGAA GCAGGCGTCC ACTTCGGTCA CCAGACCCGT
TTCTGGAACC CCAAGATGGC CCCCTTCATC TTCGGTCACC GCAACAAGAT CCACATCATC
AACCTGGAAA AGTCGCTGCC GATGTTCCAG GACGCCCAGA AGTTCGTCAA GCAACTGGCG
TCCAACGGCG GCACGATCCT GATGGTCGGC ACCAAGCGCC AAGCCCGCGA GATGGTGGCT
GCAGAAGCCC AGCGCGCTGG CGTGCCCTTC GTTGACCAGC GTTGGCTGGG CGGCATGCTG
ACCAACTTCA AGACCGTCAA GACGTCCATC AAGCGTCTGA AGGAAATGAA GGCCCAGCAA
GAAGCCGGCC TGGAAGCCAT GAGCAAGAAG GAACAGCTGA TGTTCGTTCG CGAACTGGAA
AAGCTGGAAA AGGACATCGG CGGCATCCAG GACATGAACA GCCTGCCCGA CGCCATCTTC
GTGATCGACG TGGGCTTCCA CAAGATCGCC GTGGCCGAAG CCAAGAAGCT GGGCATCCCC
CTGGTTGGCG TGGTTGACTC CAACCACAAC CCCGAAGGCA TCGACTATGT CATCCCCGGT
AACGACGACT CTGCCAAGGC TGTGCAACTG TACGCCCAAG GCATCGCCGA CGCGATCCTG
GAAGGCCGCG CTGCTGCACT GACCGACGTG GTCAAGGCTG CATCCGGCGA GAGCGGTGAC
GAGTTCGTGG AAGTGGAAGA ATCCGCTGCC TGA
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| Protein sequence | MSVTMREMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKSLPMFQ DAQKFVKQLA
SNGGTILMVG TKRQAREMVA AEAQRAGVPF VDQRWLGGML TNFKTVKTSI KRLKEMKAQQ
EAGLEAMSKK EQLMFVRELE KLEKDIGGIQ DMNSLPDAIF VIDVGFHKIA VAEAKKLGIP
LVGVVDSNHN PEGIDYVIPG NDDSAKAVQL YAQGIADAIL EGRAAALTDV VKAASGESGD
EFVEVEESAA
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