Gene Daci_4945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4945 
Symbolfrr 
ID5750552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5466965 
End bp5467525 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID641300065 
Productribosome recycling factor 
Protein accessionYP_001565959 
Protein GI160900377 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.345232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG CAGACATCAA GAAGACCACC GAGTCCAAGA TGGGCCAGTC CATCGAAGCG 
CTCAAGAACA ATCTTGCGCG TGTGCGTACC GGCCGTGCCA ACCCCTCGCT GCTGGACTCC
ATCCATGTGG ATTACTACGG CTCCATGGTG CCGCTGTCCC AGGTGGCCAA CGTGAACCTG
CTCGATGCGC GCACCATCAG CGTGCAGCCC TGGGAAAAGA GCATGTCCGC CAAGGTGGAG
AAGGCCATTC GCGAAAGCGA TCTGGGTCTG AACCCTGCCT CGCTGGGTGA TCTGATCCGT
GTGCCCATGC CTCCCATGAG CGAGGAACGC CGCAAGGAAA TGACCAAGCT GGCCCGCAAC
GAAGGCGAAG CTTCCAAGAT CGCCGTGCGC AACCTGCGCC GCGACGCCAA CGAAGCCGTC
AAGAAGCTGG TCAAGGACAA GGAAGCCTCG GAAGACGACC AAAAGCGTTG CGAAGCCGAT
GTCCAGAAGA TGACCGACAA GCACATCACC GAGATCGACG CGCTGGTGGC TGCCAAGGAA
CAAGACATCA TGGCGGTCTG A
 
Protein sequence
MTIADIKKTT ESKMGQSIEA LKNNLARVRT GRANPSLLDS IHVDYYGSMV PLSQVANVNL 
LDARTISVQP WEKSMSAKVE KAIRESDLGL NPASLGDLIR VPMPPMSEER RKEMTKLARN
EGEASKIAVR NLRRDANEAV KKLVKDKEAS EDDQKRCEAD VQKMTDKHIT EIDALVAAKE
QDIMAV