| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4942 |
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| Symbol | |
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| ID | 5750549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5464140 |
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| End bp | 5465318 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300062 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001565956 |
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| Protein GI | 160900374 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.313132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AAATCACCGT CCTGGGCTCC ACGGGCTCCA TCGGTACCAA TACGCTGGAC
GTGGTGGCGC GCCACCGCGA GCACTACGAG GTCTTTGCAC TCAGCGCGGC CACGCAAGTG
GACCTGATGC TGCGCCAGTG CGCCGAATTC AAGCCCCGCT ACGCCGTCAT GGCCAGCGCG
CCACACGCGA AGCTGCTGGC TGAACAGCTG CGCAGCAATG GGCTGGCGAC CGAAGTGCTG
CAGTCGCCAG ACGCGCTGGA GCAGATCGCC TCGCATCCCG AGGTCGATGC CGTCATGGCT
GCCATCGTCG GTGCGGCGGG CCTTGCGCCT TGTCTGGCGG CCGCGCGCGC GGGCAAGCGC
CTGCTGCTGG CCAACAAGGA GGCTCTGGTT GTTGGCGGCG CACTGTTCAT GGACACGGTC
AAGCGCCATG GCGCGACCCT GCTGCCCATA GACAGCGAGC ATTCGGCCAT TTTCCAGTGC
CTGCCGGAAG ACCGAGCCAG CTGGCCCGAT CGCGTGGACA GCCTGCTGCT CACGGCCTCG
GGCGGACCCT TTCGCTTGCG CGATCCGGCC ACCTTGTCCG AGATCACGCC GGAGCAGGCC
TGCGCGCACC CGAACTTCTC CATGGGGCGC AAGATCTCCG TGGACTCGGC GACCATGATG
AACAAGGCGC TGGAGGTCAT CGAGGCACGC TGGCTGTTCG ACATGGCTCC CGACAAGATC
AAGGTCGTCA TCCACCCGCA GCAGATCGTG CACTCCATGG TGCAGTTCAA GGATGCCTCG
GTGCTGGCAC AACTGGGCAC GCCCGACATG CGCGTGCCCA TCGCCTCCGG CCTGGCCTGG
CCACGGCGCA TCGCCAGCGG CGCGGCGCCC CTGGATTTCG CGAAGCTGTC GGCCCTGACC
TTTGAAGAGG CGGATGCCGT GCGCTTTCCG GGCCTGCATC TTTCCTGGCA GGCGCTGCTC
GCCAGCGAGG GAACTACGGC GGTTCTCAAT GCTTCCAACG AAGTCGCCGT TGCCGCCTTC
CTGGAGCGAC GCCTGGCATT TGACCGTATC CACGCTGTGA ATTTGCGCAC TCTCGAAACC
TTGCTGCCGC CTACACTGGG CAGCCTGGAC GACCTGCTGG CCCTGGACGC CCAGGCCCGC
GAAATCGCGC ACACCGTGGC TCGGCAGTGG CAGCTGTAG
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| Protein sequence | MKQKITVLGS TGSIGTNTLD VVARHREHYE VFALSAATQV DLMLRQCAEF KPRYAVMASA
PHAKLLAEQL RSNGLATEVL QSPDALEQIA SHPEVDAVMA AIVGAAGLAP CLAAARAGKR
LLLANKEALV VGGALFMDTV KRHGATLLPI DSEHSAIFQC LPEDRASWPD RVDSLLLTAS
GGPFRLRDPA TLSEITPEQA CAHPNFSMGR KISVDSATMM NKALEVIEAR WLFDMAPDKI
KVVIHPQQIV HSMVQFKDAS VLAQLGTPDM RVPIASGLAW PRRIASGAAP LDFAKLSALT
FEEADAVRFP GLHLSWQALL ASEGTTAVLN ASNEVAVAAF LERRLAFDRI HAVNLRTLET
LLPPTLGSLD DLLALDAQAR EIAHTVARQW QL
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