Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4941 |
Symbol | |
ID | 5750548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5462687 |
End bp | 5464057 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641300061 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_001565955 |
Protein GI | 160900373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.24576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGCTGA CCGTAGTTGC ATTCGTGGTC GCGCTGGGCG TGCTGATTGC CGTCCACGAG TGGGGCCACT ACCGCGTCGC TGTGGCCTGC GGCGTGAAGG TGCTTCGGTT TTCCGTCGGC TTCGGTCGCC CCATCCTGCG CTGGAAGCGC AAAGGTTCGG ACACGGAATT CGTCATCGGT GCACTGCCGC TTGGCGGCTA TGTGCGCATG CTCGACGAGC GTGAGGGCGA AGTCCCTGCC GACCAGCGCC ATCTGGCATT CAACACCCAG CCGCTGCGTG CACGTGCGGC CATCGTGGCG GCAGGCCCGG TGGCCAACCT CGTGCTGGCC ATTGCGCTGC TGGCCATCGT CAATTGGATG GGCATGCAGG AGCCCGTGGC GCGGTTGGCC ACGCCGCCGG CGGGCACGGT GCTGCAGATG GCGGGCGTGC AGGGCGGCGA TCGCGTGCTG CGCATCGCCT TGGGCGACCA GGAGTGGGAA GAGGTCCGCT CCATCAATGA TCTGCGCTGG ACACTGACGC GCGCCGCGCT CGATGACGAG TCGGTGCGCA TGGAAGTGCT CCAGGGCCGG CGCACGGCTC CGTCCGAACT GCGGCTGGCG CTGGCCGGGC AGGTGCAGGG CGAGCCCGAT GCCGCCTTCT TCGAGCGCCT GGGCCTGCTG GGGCCCTGGA CACAGCCCGT GCTGGACAAG GTGATCGCCG GTGGTGCCGC CGAAAAGGCC GGCTTGCGCC AGGGCGACCT GGTGCTGCGC GTGGGCAGCA CCCTGGTTGA TGACGGCACC CAGCTGCGCA ATCTCATCCG CAAGATGGGT GCATCGGGCC AGGTCCAGCA GCAGGTCTGG CTGGTGGAGC GCGATGGCAG GCAACTGCAG ATCCCCGTGC TGCCCGATCT GGGCCGCTCG GAAGATGGCA AGGAGAGCAT CGCCCGCATC AGTGCCTACA TCGGCAGCGC TCCCGAGATG GCTCTGGTGC AGCGCGGTCC GCTGGAAGGC CTGTGGGCTG GCGTGCAGCG CACCTGGGAG CTGTCGTCGC TGACGCTGCG CATGATGGGC CGCATGGTGA TAGGCGAGGC ATCGCTCAAG AACATCAGCG GCCCCTTGAC CATTGCCGAC TATGCGGGGC GTTCGGCCAG CATGGGCCTG GTTCAATACC TGTCGTTCCT GGCGCTGATA AGCATCAGCC TGGGGGTTCT CAACTTGCTC CCCCTGCCGG TGCTCGATGG CGGGCACCTG ATGTATTATC TTTGGGAGGG CGTGACTGGC CGAAGCGTGT CGGAAGTCTG GGCCGGGCGC TTGCAGCGTG CAGGCGTGGC GGTTTTGATG ATGATGATGT CCGTCGCCTT TTTCAACGAT ATCAACCGGC TTTGGGGCTA A
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Protein sequence | MLLTVVAFVV ALGVLIAVHE WGHYRVAVAC GVKVLRFSVG FGRPILRWKR KGSDTEFVIG ALPLGGYVRM LDEREGEVPA DQRHLAFNTQ PLRARAAIVA AGPVANLVLA IALLAIVNWM GMQEPVARLA TPPAGTVLQM AGVQGGDRVL RIALGDQEWE EVRSINDLRW TLTRAALDDE SVRMEVLQGR RTAPSELRLA LAGQVQGEPD AAFFERLGLL GPWTQPVLDK VIAGGAAEKA GLRQGDLVLR VGSTLVDDGT QLRNLIRKMG ASGQVQQQVW LVERDGRQLQ IPVLPDLGRS EDGKESIARI SAYIGSAPEM ALVQRGPLEG LWAGVQRTWE LSSLTLRMMG RMVIGEASLK NISGPLTIAD YAGRSASMGL VQYLSFLALI SISLGVLNLL PLPVLDGGHL MYYLWEGVTG RSVSEVWAGR LQRAGVAVLM MMMSVAFFND INRLWG
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