| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4938 |
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| Symbol | lpxD |
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| ID | 5750545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5458804 |
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| End bp | 5459811 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300058 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001565952 |
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| Protein GI | 160900370 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0964903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0759463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTAT TGTTGGGTCA GATCCTCGAT GCACTCGGTG GCGAACTGGT CGGTGGCGAC
AGGGAGATGC CCATCTCCCG CATCGCGCCG CTGGATTCCG CCGGGGCCGG GGATCTCAGT
TTTCTGAGCA ACCCCCGCTA CCGCCAGCAA CTGGCCGCCT CCGAGGCGGC CTGCGTTATT
GTGGCGCCCG CCATGCGTGA GCTGGCGCAG CAGCGGGGTG CCTGCATCGT GGTCCCTGAC
CCGTATGCCT ACTTCGCCAG GGCCACGCAG TGGTGGAAGC GGAACTGCAG GTCTGTGGCG
CCGGCCGGTA TTCATCCAAG CGCGGTGGTG CATGAGAGTG CCATCGTTGA TGCCTCTGCC
ACGATCGGCC CGCTCTGCGT GGTTGAAGAG GGTGCCACCA TCGGTGCCCA CACCGTGCTG
AAGTCGCGCG TCACTATTGG CGAGAACTGC CATGTGGGGG CGCGCTGTCT GCTGCATTCC
GGCGTGGTGC TGGGAGCGGA CGGCTTCGGG TTTGCTCCCG AGAACGGAGC ATGGGTGAAG
ATCGAGCAGC TCGGTGGCGT GCGGATCGGC GACGATGTGG AAATCGGCGC CAATACCTGC
ATAGACCGCG GAGCGCTGGA CGACACGGTG ATCGAGGACG GGGTCAAGCT CGACAACCTG
ATCCAGATCG GTCACAACGT GCACGTCGGC AAGCATACGG CCATGGCCGG TTGCGTGGGG
GTGGCCGGCA GCGCGCGCAT TGGCGCGCAT TGCACCGTGG GAGGCGGCGC CATCGTGCTG
GGCCATCTGC AGCTGGCCGA CAGGGTGCAT ATTTCGGCAG CGACGGTAGT GACCCGTTCG
CTGACACAAT CAGGTGTTTA CACGGGCATG TTTCCCGTGG ATGAAAACGC CAAATGGGAA
AAAAATGCTG CGACGCTGAA GCAGCTGCAC TCCATGCGCG ATCGCATCAA GGCCCTGGAG
CGGCAACTGC AGCAATCGGC GGATCAAGGC CATAACGGAA CGCAATGA
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| Protein sequence | MSVLLGQILD ALGGELVGGD REMPISRIAP LDSAGAGDLS FLSNPRYRQQ LAASEAACVI
VAPAMRELAQ QRGACIVVPD PYAYFARATQ WWKRNCRSVA PAGIHPSAVV HESAIVDASA
TIGPLCVVEE GATIGAHTVL KSRVTIGENC HVGARCLLHS GVVLGADGFG FAPENGAWVK
IEQLGGVRIG DDVEIGANTC IDRGALDDTV IEDGVKLDNL IQIGHNVHVG KHTAMAGCVG
VAGSARIGAH CTVGGGAIVL GHLQLADRVH ISAATVVTRS LTQSGVYTGM FPVDENAKWE
KNAATLKQLH SMRDRIKALE RQLQQSADQG HNGTQ
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