| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4936 |
|---|
| Symbol | |
|---|
| ID | 5750543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5457562 |
|---|
| End bp | 5458359 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641300056 |
|---|
| Product | acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase |
|---|
| Protein accession | YP_001565950 |
|---|
| Protein GI | 160900368 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00295867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.11003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCA TTGAACGCAT CCATCCCACG GCACTGATAG ATTCCGCTGC ACAGCTGGAT
TCATCGGTGT CGGTCGGCCC CTATGCCGTC ATCGGGCCGC ATGTGGAAAT CGGCGCCGGC
ACCACGATTG GCGCGCATTG CGTTGTCGAA GGCCATACCC GCATTGGTTG CGACAACCGG
ATTTTCCAGT TCGCGTCCCT GGGCGCGCAG CCCCAGGACA AGAAGTACGC AGGCGAGCCC
ACGCGGCTTG TCATCGGTGA CCGCAACACG GTGCGCGAGT TCTGCACCTT CAATGCGGGC
ACCGTGCAGG ACCAGGGTGT CACGGTCATC GGCCATGACA ACTGGATCAT GGCCTATGTG
CATGTGGCCC ACGACTGCGT CGTGGGCAGC CACACCATCC TGGCCAACAA CGCCACCCTG
GCCGGCCACG TGCATGTGGG CGACCATGTG ATCCTGGGCG GCCTGACGGG CGTGCACCAG
TTCACCAAGG TGGGCGCCCA TGCCATGGCG GGCTTTGCCA GCCATATCTC GCAGGATGTG
CCGCCCTTCA TGATGGTGGA TGGCAATCCC CTGTCCGTGC GTGGCTTCAA TATCGAAGGC
CTGCGCCGGC GCGGATTCGG GCCGCAGCGT ATCCAGGCCA TCAAGCAGAT GCACCGTCTG
CTGTATCGCC AGGGGCTGAC CCTGGAGGCC GCGCGCGACG CCATTGGAGC GCTGGCTGGC
GAGCAGCCCG AGGCCGCTGC CGATGTATCG CTGATGCTGG ATTTTCTGGG CGCTTCGACC
CGGGGCATTG CGCGCTGA
|
|---|
| Protein sequence | MAGIERIHPT ALIDSAAQLD SSVSVGPYAV IGPHVEIGAG TTIGAHCVVE GHTRIGCDNR
IFQFASLGAQ PQDKKYAGEP TRLVIGDRNT VREFCTFNAG TVQDQGVTVI GHDNWIMAYV
HVAHDCVVGS HTILANNATL AGHVHVGDHV ILGGLTGVHQ FTKVGAHAMA GFASHISQDV
PPFMMVDGNP LSVRGFNIEG LRRRGFGPQR IQAIKQMHRL LYRQGLTLEA ARDAIGALAG
EQPEAAADVS LMLDFLGAST RGIAR
|
|---|
| |