| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4935 |
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| Symbol | lpxB |
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| ID | 5750542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5456350 |
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| End bp | 5457540 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300055 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001565949 |
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| Protein GI | 160900367 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0247696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.131407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA ACGCGGCGCC ATTGGCGCGC CTGAGTCCAT CGATTGCCAT GGTCGCCGGG
GAAACCTCAG GCGACCTGCT GGCGTCCTTG CTCCTGGATG GGCTGCAGGC CCGCTGGCCC
GAGGCTTCGG CCTTTGGCAT CGGCGGGCCC CAAATGCAGC AGCGCGGTTT TGAGGCATGG
TGGTCCTGCG AGCGGCTGGC CGTGCATGGC TACAGCTGGG AAGTGTTTCG CCGGTTGGCC
GAGATTCTGA ACATCCGCCG GCAGTTGCGC CAGCGCCTGC TCAAGCAGCC GCCAGCCGTT
TTTGTCGGCA TCGATGCGCC CGACTTCAAC CTGGGCCTGG AAGCCGACCT GCGGGCTGCG
GGCATCAAGA CCGTGCATTT CGTCTGCCCT TCGATCTGGG CCTGGCGTGC CGATCGCGTC
GAGAAAATCC GGCGTGCGGC CGACCATGTG CTGTGCATCT TTCCCTTCGA GCCCGAGTTG
CTGGCCCGTC ACGGCATAGA TGCCACCTAC GTGGGCCATC CCCTGGCCAG CGTGATTCCG
CTGCAGCCCG ACCGTGCCGC CGCGCGCCGT CGGCTGGGTC TGCCGGAAGA TGGTCTGGTG
CTGGCCGTGC TGCCCGGCAG CCGACGCTCC GAAATCCGCT ATCTTGCAGC CCGTTTCTTT
CAGGCTGCAG CTTTGGTCCG GAAGGCGCTG CCAGCTATTA AAATAGTAGT GCCTGCCGTG
CCTTTGCAAC TGGACGAGTT GCGGCGCATT GCCCAGGAGT CCGGCATGGC CTCGTCGCTG
CACATCGTGC GCGGCCAGTC CCATGATGCA TTGGCAGCCT GCGACGTGAC GTTGATCGCC
AGCGGCACAG CCACGCTGGA AGCCGCGTTG TACAAGCGTC CCATGGTGAT CGGCTACAAC
ATGCACCCCT GGAGCTGGCG CCTGATGCGT GGCAAGCAGT TGCAGCCCTG GGTGGGCCTG
CCCAACATCC TGTGCGGCGA TTTCGTCGTG CCCGAGCTGA TCCAGGATGC GGCAACGCCC
CAGGCGCTGA GCGCGGCTGT GCTGCAATGG CTGCAGGCGT GCGAACATTC CCCTTCAACC
GTCGAGGCGC TGGTACAGCG CTTCACAGCG CTGCACCATG AATTGCGGCG CGATACTGCC
GAACTGGCCG CCCATGCGAT CGAGAAAATC ATTGCCCCCA CTGCCGCCTG A
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| Protein sequence | MTENAAPLAR LSPSIAMVAG ETSGDLLASL LLDGLQARWP EASAFGIGGP QMQQRGFEAW
WSCERLAVHG YSWEVFRRLA EILNIRRQLR QRLLKQPPAV FVGIDAPDFN LGLEADLRAA
GIKTVHFVCP SIWAWRADRV EKIRRAADHV LCIFPFEPEL LARHGIDATY VGHPLASVIP
LQPDRAAARR RLGLPEDGLV LAVLPGSRRS EIRYLAARFF QAAALVRKAL PAIKIVVPAV
PLQLDELRRI AQESGMASSL HIVRGQSHDA LAACDVTLIA SGTATLEAAL YKRPMVIGYN
MHPWSWRLMR GKQLQPWVGL PNILCGDFVV PELIQDAATP QALSAAVLQW LQACEHSPST
VEALVQRFTA LHHELRRDTA ELAAHAIEKI IAPTAA
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