Gene Daci_4914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4914 
Symbol 
ID5750521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5430450 
End bp5431151 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID641300034 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_001565928 
Protein GI160900346 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.24576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA AACACCTTTC CAGCCAGTTC GACAGCGAAC TCAACCGCGT CTCTGCGCGC 
GTCATGGAGC TCGGCGGCCT GGTCGAGTCC CAGATCCGCC AGGCGGTCTA TGCGCTGTCG
CGCTTCAGCA TCGAGGCCGT GGAGCAGGTC GATGCCGCGG AAAAGCGCGT CAACGCCATG
GAAGTGGAGA TCGACCACGA GCTCTCGTCC ATCATCGCCC GGCGCCAGCC CACGGCGCGC
GACCTGCGCC TGCTGATCGC CTTCTCCAAG GCCACGGCCA ATCTGGAGCG CATGGGTGAC
GAAGCGCACA AGATGGCGCG GATGGTCAAG TCCATCATCG AAAGCGGTGC TGCGCGCTCC
CTGCCCACCG GCGACCTGCG CACGGCGGCC GAGATGGCCT CGGGCCTGCT GCGCAAGACG
CTGGACGCCT TTGCACGCCT GGACACCAAG GCGGCCGTGG CCATCCTCAA GGAAGATGAT
CTGATCGACC AGGAGTTCGA CGGCTTCGTG CGCAAGCTCA TCACCTACAT GATGGAAGAC
CCGCGCACCA TCTCGGCCAG CCTGGACCTG CTGTTCCTGG CCAAGGCCAT TGAGCGCATC
GGCGACCATT CCAAGAATGT GGCCGAGCTG ATCATCTATC TGGTGGAGGG CAAGGATGTC
CGTCACCAGA CCATGGATGC CATTGAGTCG GCAGTGCTGT AA
 
Protein sequence
MNEKHLSSQF DSELNRVSAR VMELGGLVES QIRQAVYALS RFSIEAVEQV DAAEKRVNAM 
EVEIDHELSS IIARRQPTAR DLRLLIAFSK ATANLERMGD EAHKMARMVK SIIESGAARS
LPTGDLRTAA EMASGLLRKT LDAFARLDTK AAVAILKEDD LIDQEFDGFV RKLITYMMED
PRTISASLDL LFLAKAIERI GDHSKNVAEL IIYLVEGKDV RHQTMDAIES AVL