| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4911 |
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| Symbol | |
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| ID | 5750518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5426823 |
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| End bp | 5428190 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300031 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001565925 |
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| Protein GI | 160900343 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.646468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CCGCGCGCGC GCCACTGGGC ACCGAACGGC GCACCATCGC CCAGCACGCG
CTGACCGTGC TGGCCGGACA GCTGGCGGTG ATGGCCTTCG GCGTGACCGA CACCATCGTG
GCGGGCCGCT ACGCCGAAGA AGCGCTGGCA GCGCTGTCCG TGGGCTCGGC CATCTTCGTG
AGTGTCTATG TCTCGCTGAT GGGCATCTTC CAGGCCCTGC TGCCGCTGTG GGCCGAGCAT
CGCGGCGCCG GACAGCCCGA GGCCATAGGC CGCACGCTGC GCCAGGCCAT GTACATGCTG
CTGGCCGCCT GCGCCCTGGG CATGGGCGTG CTGCTGTTTC CCGATGCGCT GCTGCGCTGG
GCCGATGTGC CGCCACCGCT GCAGGTGGAG GTGCGGGCCT ATCTTTCGGT GCTGGCCTGG
AGCCTTCCGG CCGCGCTGCT GTTTCGCATC TACAGCACAC TGAACCAGGC GCTGGGCCAT
CCCCTGCTGG TGACCTGGCT GCAGTTGCTG TCGCTGCTGC TGAAAATCCC CCTGTCGATC
TGGCTGGCCT TTGGCGGCGC CGGCCTGCCT GCGCTGGGCG CCGAGGGCTG TGCCTGGGCC
ACGCTGGTGG TGAACTACGC CATGGTTGCC CTCGCATTCG TGCTGATGCG CAGCCAGCGC
CTGTATGCGC CCCTGGCGCT GTGGCAGCGC ATGGAGCCCC CGGACTGGCC GCAACTGGCG
CAGTTCGCTC GACTGGGCGT TCCTGCAGGG CTGGCAATTT TGGTGGAGGT GACCTCGTTC
ACGCTGATGG CCTTGTTCGT GGCGCGCCAG GGCACGCTGT CCTCGGCCAG CCACCAGATT
GCTGCCAATC TTGCGGCGCT GTGCTACATG GTGCCCCTGT CCCTGGCGAT TGCCACCAGC
GCGCGGATCA GCTACTGGCG CGGCGCGGGG GACGAGGCCA TGGCGCGCCG CCTTGTCACC
ATGGGATGGC GGCTTGCGGC AACGGGTGGA CTGGTGCTGG CCTCGGCACT GTTCCTGTCC
CGCGAGGGCC TGGCCAGCAT CTACAGCAGC AACCCCGAGG TGGTGTCCAC TACCGCCAGC
CTGCTGGCCT GGGTGGCTGC CTACCATGTG GCCGACGCCG TGCAGACCTT CTGCCTCTTC
GTGCTGCGCT GCTACCGCAT CACCGTGGCG CCGCTGGTCA TCTACTGCCT GCTGCTGTGG
GGCGGCGGAC TGGCCGGCGG ATACTGGCTG GCCTACGGCA CGGACAGCGC CCTGCCCGCC
TGGCTGCACC ATGGCACGCC CGCCCCGTTC TGGGCCAGCA GTGCCTGTGC GCTGCTGGTG
ACGGCCCTGG TGTTCAGCGC CATCGTGCGC AAAGCCACAA GCCGCTGA
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| Protein sequence | MSQPARAPLG TERRTIAQHA LTVLAGQLAV MAFGVTDTIV AGRYAEEALA ALSVGSAIFV
SVYVSLMGIF QALLPLWAEH RGAGQPEAIG RTLRQAMYML LAACALGMGV LLFPDALLRW
ADVPPPLQVE VRAYLSVLAW SLPAALLFRI YSTLNQALGH PLLVTWLQLL SLLLKIPLSI
WLAFGGAGLP ALGAEGCAWA TLVVNYAMVA LAFVLMRSQR LYAPLALWQR MEPPDWPQLA
QFARLGVPAG LAILVEVTSF TLMALFVARQ GTLSSASHQI AANLAALCYM VPLSLAIATS
ARISYWRGAG DEAMARRLVT MGWRLAATGG LVLASALFLS REGLASIYSS NPEVVSTTAS
LLAWVAAYHV ADAVQTFCLF VLRCYRITVA PLVIYCLLLW GGGLAGGYWL AYGTDSALPA
WLHHGTPAPF WASSACALLV TALVFSAIVR KATSR
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