Gene Daci_4905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4905 
Symbol 
ID5750512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5419932 
End bp5420264 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content60% 
IMG OID641300025 
Productthioredoxin 
Protein accessionYP_001565919 
Protein GI160900337 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCG AACTGATCAA ACACATCTCC GACGCAAGCT TTGAAGCCGA CGTCTTGCAG 
CCTGGCACCA CGGTGCTGGT CGATTACTGG GCCGAATGGT GCGGCCCCTG CAAGATGATC
GCCCCCATCC TCGACGAAGC AGCGCAGACC TACAAGGAAA AGCTGTCCAT CGCCAAGATG
AATGTGGACG AGAACCGCGA GATCCCCGCC AAGTTCGGCA TCCGCGGCAT TCCCACGCTG
ATGCTGTTCA AGGATGGCCA GCTGGCCGCC ACCAAGGTGG GCGCCCTCAA CAAGGCACAG
CTGTCCGCTT TCCTGGAACA GCACCTGGCC TGA
 
Protein sequence
MASELIKHIS DASFEADVLQ PGTTVLVDYW AEWCGPCKMI APILDEAAQT YKEKLSIAKM 
NVDENREIPA KFGIRGIPTL MLFKDGQLAA TKVGALNKAQ LSAFLEQHLA