| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4899 |
|---|
| Symbol | |
|---|
| ID | 5750505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5413052 |
|---|
| End bp | 5414137 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641300018 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_001565913 |
|---|
| Protein GI | 160900331 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.992021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTGCA TGCGGGCTCT GGGCATGATC GTGCTGCACT GCAGCAAAAT AACCACCATG
TCTTCCCACG TGCTTGATCG CCGAACCTTG TTGAGCCTCA TGGGGCTGGG TTCCCTTTGG
TCGTTTCCTT CCCTCGGTTC GGCCGAGCTG GTGACGATTT CCGTGGGCGG TCAGGGCCTG
CTGTATTACC TGCCGCTGGT GATTGCCCAG CAACTGGGGT ACTTCGAGGC CGAGGGCCTG
ACCGTGCGCA TCGATGACTA TCCGGGCGGG TCGCAGTCGC TGCAGGCGCT GGAATCGGGC
GCCGCCGATG TGTGCGCGGG TGCCTATGAA CACACGCTTG TCGCGCAGCA GCGCGGCAGT
GTGCTGCGTG CCTTCGTCGT GCAGGGGCGT GCGCCGCAGA TTGCGCTGGG CGTGTCCTCG
CGCTGGATGC CGCGCTACCA GACGCTGGCC GACCTGCGCG GGCGGCGCGT GGGCGTGTCC
TCGCTGGGCG CATCCACGGC CCGGGCCGTG CAACTGATGC TGCTGGGCGA TGGTCTGGAG
GCCGATCTGG TGCAACTGGT GGGTGTGGGC TCGGGGCCTG ACGCCATGGA GGCGCTGCGC
ACCGGGCGCG TGCATGCGCT GTGCCATGCG GACCCGCTGA TGAGCGTGCT GGAGGACAAG
GGAGCCGTGC GCATCGTCAG AGACCTGCGT GATCTGCGCA GCAGCGCACA GCTGTACGGC
GGCTCCATGC CCTCGGGCAC GCTGTACGCG ACCCAGGCCT TTTTGCGCAA GAACCCTGCC
AAGGCCCAGG CGCTGAGCAA TGCCATGGTC CGATCGCTCA AGTGGCTGCA GACCGCCGCG
CCCATGGATG TGCTCAGGGC CGTGCCTGCA CCCTATCTGC TGGGCTCGCG GCGCGCCTAT
CTGTCGGCCT TCGAGCACAT GCGCACCACC ATCTCGCCGG ATGGCCTGAT GCCCGATGAC
GGGCCTGCCA CGGCCCTGCG CGCCCTGGTC CGGCTCAACC CTGCGCTGGC GCGCAGCGGT
ATCGACCTGG AGCGCTCGTT CACCAACGAA TTCGTGCGGC AGTCCCGCCA GCGTTTCCAC
ACCTGA
|
|---|
| Protein sequence | MLCMRALGMI VLHCSKITTM SSHVLDRRTL LSLMGLGSLW SFPSLGSAEL VTISVGGQGL
LYYLPLVIAQ QLGYFEAEGL TVRIDDYPGG SQSLQALESG AADVCAGAYE HTLVAQQRGS
VLRAFVVQGR APQIALGVSS RWMPRYQTLA DLRGRRVGVS SLGASTARAV QLMLLGDGLE
ADLVQLVGVG SGPDAMEALR TGRVHALCHA DPLMSVLEDK GAVRIVRDLR DLRSSAQLYG
GSMPSGTLYA TQAFLRKNPA KAQALSNAMV RSLKWLQTAA PMDVLRAVPA PYLLGSRRAY
LSAFEHMRTT ISPDGLMPDD GPATALRALV RLNPALARSG IDLERSFTNE FVRQSRQRFH
T
|
|---|
| |