| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4898 |
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| Symbol | |
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| ID | 5750504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5411440 |
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| End bp | 5412975 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300017 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001565912 |
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| Protein GI | 160900330 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TACACACCCT GCTGCTGGGC AGCCTGCTGG CTCTTGCGGG CTGCGCCACC
ACCAGCAGCC CGGACCTGGC CAGCACGGCC CCCGCCCCCA GCACCGCACC GCACTCCCCG
ATGTACCCCA ACGGACCGCT GAGCCCGCTG GGCACAGGCA GCGCCGGCAA CGGCGGCGTG
GCCTCGCTGG AGACCACGGG CGATCTGTGG GTACGCATTC GCCAGGGCTT CGCCATGCCC
GACCTGGACC AGGATCTGGT CAAGGACCGC GAGCAGTGGT ATGCCAGCCG GCCCGACTAC
ATACAGCGCA TGACCGAGCG CTCCAGCAAG TACCTGTTCC ACATCGTCGA GGAACTGGAG
CGGCGCAACA TGCCCACCGA GCTGGCGCTG CTGCCCTACA TCGAGAGCGC CTTCAACCCG
CAGGCCGTCT CCACCGCCAA GGCGGCCGGC ATGTGGCAGT TCATGCCGGC CACCGGCACC
TATTTCGACC TCAAGCAAAA CGCCTTCCGC GACGACCGCC GCGACGTGCT GGCCTCCACG
CGCGCCGCGC TGGACTACCT GCAAAAGCTC TACGACATGT TCGGCGACTG GCACCTGGCC
CTGGCCGCCT ACAACTGGGG CGAAGGCAGC GTGGGCCGCG CCATCAAGCG CAACGAGAAG
CTGGGCCTGC CCACGGGCTA CACCGACCTG CAGATGCCGG CCGAGACCCG CATGTACGTG
CCCAAGCTGC AGGCCGTCAA GAACATCGTG GCCAACCCCG ATGCATTCAA CACCGAGCTG
CCGCTGATCG AGAACCACCC CTACTTCCAG ACCGTCACCA TCACCCGTGA CATCGACGTG
GAACTGGTGG CCAAGCTGGC CGATGTATCG ACCGATGACT TCAAGGCGCT CAATCCCAGC
TTCCGCAAGC CGGTGATCTT TGCGGCCGGC ACGCCGGAAA TCCTGCTGCC CTGGGACAAC
GCCAAGGTGT TCCGCCGCAA CATGCAGGCC TTCGACGAAG GCCAGTACGC GAGCTGGACC
GTGTGGACCG TGCCCTCCAC CATCAGCGTG GCCGAGGCGG CCCAGCGCGT GGGCCTGGGC
GAGTCCGACC TGCGCGCCCT CAACAACATC CCGCCCCGCA TGCTGATCAA GGCCGGCTCC
GCGCTCATGG TGCCGCGCGG CGCCAACGTG CGTGCCGACG TGGCCGGCCA CGTGGCCGAC
AACGGCCAGA TCAGCTTTGC CCCCGAGATC GTCACGCGCC GCACCACCAT CAAGGCCCGC
AAGCGCGACA CGCTGATCAG CGTGGCCAAC CGCTACGGCG TCAGTGCGTC CAATCTGGCG
GACTGGAATG ACCTGAAGTC ATCCGCCACC TTGCATGCCG GCCAATCGCT GGTGGCCTAC
CTGCCGGTGC GCGCCAGCAG CGGCGGCAAT GCCCGGGCGG CCAAGTCCAC CGGAACCGCG
CGCAAGGTAG CCGTGCAGCC GCAAAACCGC AATGCCAAGG TGTCGGTCAC CACAGCGCCG
CGTGGCGGCA AGCCATCCAA GGTGAAAAAG CGCTGA
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| Protein sequence | MKLLHTLLLG SLLALAGCAT TSSPDLASTA PAPSTAPHSP MYPNGPLSPL GTGSAGNGGV
ASLETTGDLW VRIRQGFAMP DLDQDLVKDR EQWYASRPDY IQRMTERSSK YLFHIVEELE
RRNMPTELAL LPYIESAFNP QAVSTAKAAG MWQFMPATGT YFDLKQNAFR DDRRDVLAST
RAALDYLQKL YDMFGDWHLA LAAYNWGEGS VGRAIKRNEK LGLPTGYTDL QMPAETRMYV
PKLQAVKNIV ANPDAFNTEL PLIENHPYFQ TVTITRDIDV ELVAKLADVS TDDFKALNPS
FRKPVIFAAG TPEILLPWDN AKVFRRNMQA FDEGQYASWT VWTVPSTISV AEAAQRVGLG
ESDLRALNNI PPRMLIKAGS ALMVPRGANV RADVAGHVAD NGQISFAPEI VTRRTTIKAR
KRDTLISVAN RYGVSASNLA DWNDLKSSAT LHAGQSLVAY LPVRASSGGN ARAAKSTGTA
RKVAVQPQNR NAKVSVTTAP RGGKPSKVKK R
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