| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4894 |
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| Symbol | |
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| ID | 5750500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5408083 |
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| End bp | 5409168 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300013 |
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| Product | porin |
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| Protein accession | YP_001565908 |
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| Protein GI | 160900326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA AAGCAATTGC CGCATTGGCG ATGCTGGGCG GCGCGGGAGC GGCGCTGGCC
CAGAGTTCGG TGACGCTGTA CGGCAGCATG GACCTGACCA TGCCCTGGAT CAGCGATGTT
CGCGGGAGCC GGCTGACGCG CATGGATTCG GCCATTTCCC AGCCTGACCT CTGGGGCCTG
CGCGGATCGG AGGACCTGGG CGGCGGCCTG AAGGCCTCGT TCCAGCTGGA GAACGGATTC
CTCACGGACA TCGGCTCGCC GATCTCGCCG ACCAGCTACT TCAACCGGGC TTCCTGGGTG
GGTCTGGACA GCGCGTCGAT GGGCTCGGTG CGGCTGGGTC GCCAGGTCGA TTTCACGGCC
GGCACGCTGA GCCAGTGGGG CAACGGCTAC CAGCTCTACA ACTTCTATCT CTACCACCCC
GGCAACCTGG ACGGTCTGTC CAGCCAGTTT CCGGTGGACA ACTCCGTGGT CTACCTGACG
CCCAGCATGG GCGGCATGCA GTTCGGCGCG CAGTACGGCT TTGGCGAGGT GCCGGGCCGC
TCGCAGGCCA ACCGCACCTA CAGCGTCATG GGCAGCTATT CCAGTGCCAA GCTCAATCTG
GCCGTGGCCT ACACCGATGC GCGTGGCCGT GCCTTCGATA TCGCCGGGCG CACGGGCCTG
GCGAACGCGC TGGGCCAGGA CCTGGTGGCG GGCCGGCCGC TGGTGCTCGA TACCTTCCAG
GTGCTGGGCA TCGGCGGCGG TTACCAGCTC GATGCGCTTC CGGTCCGGCT CAACGCGCTG
CTGACGCGCT CCACGCTGAA GTACGGCGGG GCCTCCAGCA ACATGAGTGC CCTTGACCTG
GGCCTGGCCT GGCAGACCAG CCAGTCCGTG ACCATCAACA CGGGCTACTC CTTCAGCCGC
TTCGAGCAGA CGAAGTGGAA CCAGCTGCAC CTGGGCGCAC GCTATGCCTT GTCCAAACGC
ACGCAGCTGC ATGCCTCGGT CACGCACCAG CGCGCCTCGG ATGGCGTGGC GGCGATGAAT
TCCGTGGGCG TTGCCAGCGG GCGCACGCAG ACCGTGATTG CGGCAGGCAT ACACCACTCG
TTCTGA
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| Protein sequence | MKYKAIAALA MLGGAGAALA QSSVTLYGSM DLTMPWISDV RGSRLTRMDS AISQPDLWGL
RGSEDLGGGL KASFQLENGF LTDIGSPISP TSYFNRASWV GLDSASMGSV RLGRQVDFTA
GTLSQWGNGY QLYNFYLYHP GNLDGLSSQF PVDNSVVYLT PSMGGMQFGA QYGFGEVPGR
SQANRTYSVM GSYSSAKLNL AVAYTDARGR AFDIAGRTGL ANALGQDLVA GRPLVLDTFQ
VLGIGGGYQL DALPVRLNAL LTRSTLKYGG ASSNMSALDL GLAWQTSQSV TINTGYSFSR
FEQTKWNQLH LGARYALSKR TQLHASVTHQ RASDGVAAMN SVGVASGRTQ TVIAAGIHHS
F
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