| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4892 |
|---|
| Symbol | |
|---|
| ID | 5750498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5405358 |
|---|
| End bp | 5407607 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300011 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
|---|
| Protein accession | YP_001565906 |
|---|
| Protein GI | 160900324 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.343944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGC GTCCAAGCAA TGAACGGGGC CGCACGGCCG GCTCTGCCAT CTCGCTGCGG
CGCAGGCATC TGCTCCAGAG CGCTGCCGCG CTGCTGGTGG CGCCTGCTGC CGGCAGCCTG
CTGATTCCGC TGGCGCAGGC CGCGCCAGCG CAGGCCGGTG CAGCGGCAGC AACGGCTTCC
TCCATCGGCG ACTGGGTCTG GATCGAGCCT TCGGGGCAGG TGGTGATCGG CGTGTCGCAG
TGCGAGGTGG GCCAGGGCAT CTACACGGGC CTGCCCCAGG TGCTGGCCGA CGAGCTCGAT
GCCGACTGGG CCAGCGTGAC CGTGCGCTTC GTCACGGGGC GCGACGCCTA TCGCAACGAT
GCGGGCGAGA TGCCGTTCCA GCAGTTCGTG GGCGCGTCGA TGTCGATGAA CTATTTCTAC
GAGCGCATGC GCCTGGCCGG TGCCCAGGCC CGTGATGTGC TGCTGCGTGC CGGCGCGGCC
CGGCTGGGCG TGCGGGCATC CCAGTGCAGC ACGCGCGCCG GCCGGGTGCT GCACTCCGCG
ACGGGTCGCA GCGTGGGCTA CGGCGAGATC GTGGCCGATG CCTCCAGGCT GTCCATCGCC
GCGCGCCCGC GCATGAAGTC GGCTTCCGAG CAGGGCCTGA TCGGCCGCAA CCTGCGCCGG
GTGGACACCC CGGCCAAGGT CGATGGCAGC GCGGTCTTCG GCATCGACGT CGAGGTGCCC
GGCATGCTGA TCGGCGCCGT GCGCATGGCG CCCAGCGTGA CGGGGCGCAT CGTGCGCATC
CGCAACGAGG CAGAGGTGCG CGCGCGCACC GGCGTACATG CCGTCGTGCG CACCACGCAG
TGGCCCGACC CCGAGCCCAG CACCGTGGTC GTGGTGGCCG ATTCGTACTG GATCGCCAAG
CAGGCCGCCG ACGCGCTGGA CATCGAATTC GACGCCGGCG CGGCGGCCAG CGTGGACAGC
GAGCGCATCC ATGCGCAGTT CGTCGCAGGC CTGGCCAGCG ACAAGGCCGT CGTTGCCCGC
AACCTGGGCA AGCCGCGCGA AATGCTGGCG GCGGGCAAGC CGATCACGGC CGACTACCAC
TCGCCCTACA TCACGCACGC CACCATGGAG CCGCTGGCCG CCACTGTCCA TGTGCGCGAC
GGCGAGGTCG AAACCTGGGG GCCCTACCAG GGCCAGGATT TCCTGCGCGG CGAACTCGGC
AAGGCCTGCG GGGTGCCTGC GGACAAGGTC ATCGTGCACA CCACCTTCCT CGGAGGCAGC
TTCGGGCGCA AGTACATGCC CGACTTCGCC TTGCATGCGG CAGCGGCATC CAAGGCCGTG
GGCCGGCCCG TCAAGGTCAT CCGCTCGCGC GAGGACGACA TACGGCATTC CTACTACCGG
CCCGGTGCCT CGGGGCGGCT GAGTGCCGTG CTGGGCGCCG ACGGCCTGCC TGCCGCGCTG
CATGCGCGCA TCTCGGGCCA GTCGCTGTAC GGGGCCATCA ACCCCAAGAA GATGGCCGAT
GCAGGCGGCT GGGACGAGAC CATGGTCGAG TCCATCTACG ACCTGATCTA CGGCGTGCCC
AACCTGCTGG TGGATGCCGT GGACGTGCAG CAGCCCATAC CGCTGAGCTA TCTGCGCAGC
GTGGGCACCA CGTCCAGCGT GTTCTTCCTG GAAAGCTTCA TCAGCGAGCT GGCCCACACC
GCAGGCGTGG ACGACTACCA GTACCGGCGC CGCCTGCTGG CCGGCCAGCC GCTGGCGCTG
GGCGTGCTGG ATGCGGCGGC GCGGGCCGCG CGCTGGGAGC AGCCCGCACC GGCAGGGCTG
CACCGCGCCA TGACCTTCAA CGTCTACACG GGGCGGGGCG AGAGCTTCCA GACCTTCGTC
GCACTGGTCA TGGAATTGCG TGTTGTGGAA GGCCGCGTGC GGCTGGAGCG CGCCATCTGC
GCCATCGACG CGGGCCGCGT GGTCAACCCG GGACTGGTCA AGGCCAATGT CGAAGGCGGC
ATCGGCTTTG CGCTGACCAA CACCTTCAAG AGCCGGCTGG GCTTTGACAA GGGCGTGGTG
CAGCAAAGCA ATTTCCACGA CTACCCGCTG CTGCAACTGG CCGAAATGCC CCGCGTGGAG
GTGGTCCTGG TCGAAAGCGA CCGGCCGCCC CAGGGCTGCG GCGAAGTGGC CCTGGGCCCC
ACGGCGCCTG CCGTCGCCAC GGCCCTGTTC CATGCCACCG GCCGCCGGTT CCGCTCCATG
CCGCTGCCGC AGGACATCGC GTCCACCTGA
|
|---|
| Protein sequence | MPQRPSNERG RTAGSAISLR RRHLLQSAAA LLVAPAAGSL LIPLAQAAPA QAGAAAATAS
SIGDWVWIEP SGQVVIGVSQ CEVGQGIYTG LPQVLADELD ADWASVTVRF VTGRDAYRND
AGEMPFQQFV GASMSMNYFY ERMRLAGAQA RDVLLRAGAA RLGVRASQCS TRAGRVLHSA
TGRSVGYGEI VADASRLSIA ARPRMKSASE QGLIGRNLRR VDTPAKVDGS AVFGIDVEVP
GMLIGAVRMA PSVTGRIVRI RNEAEVRART GVHAVVRTTQ WPDPEPSTVV VVADSYWIAK
QAADALDIEF DAGAAASVDS ERIHAQFVAG LASDKAVVAR NLGKPREMLA AGKPITADYH
SPYITHATME PLAATVHVRD GEVETWGPYQ GQDFLRGELG KACGVPADKV IVHTTFLGGS
FGRKYMPDFA LHAAAASKAV GRPVKVIRSR EDDIRHSYYR PGASGRLSAV LGADGLPAAL
HARISGQSLY GAINPKKMAD AGGWDETMVE SIYDLIYGVP NLLVDAVDVQ QPIPLSYLRS
VGTTSSVFFL ESFISELAHT AGVDDYQYRR RLLAGQPLAL GVLDAAARAA RWEQPAPAGL
HRAMTFNVYT GRGESFQTFV ALVMELRVVE GRVRLERAIC AIDAGRVVNP GLVKANVEGG
IGFALTNTFK SRLGFDKGVV QQSNFHDYPL LQLAEMPRVE VVLVESDRPP QGCGEVALGP
TAPAVATALF HATGRRFRSM PLPQDIAST
|
|---|
| |