Gene Daci_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4890 
Symbol 
ID5750496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5403465 
End bp5404457 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content69% 
IMG OID641300009 
Producthypothetical protein 
Protein accessionYP_001565904 
Protein GI160900322 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.979482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TCTCCATGAA AGCGAAACGC AGAACGCTCG CCCTGGGCGC GGCCATGGCC 
CTGGCGCTGC TCGCCGGTCC GGCGCAGGCC CAGACCTACC CCCACAAGCC GGTCACCATC
GTCGTGGCCT ACCCCGCAGG CGGCGATACC GACGCGCTGG CGCGGCTGCT GGGCGAGAAG
CTGTCGGCCC GCATCGGCCA GTCCGTGCTG GTGGACAACC GCGCGGGCGC CAGCGGCACC
ATAGGCAGCA GTTTCGTGGC CAAGGCACCG GCCGATGGCT ACACGCTGCT GCTGGCGCCC
AATACCTTTG CCATGGCCCA ACTGGTGCTC AAGCTGGGCA CGGGCCACGG CTACGACGTG
CTCAATGGCT TCACGCCCGT GATCGAGGTC GGCTCCACTT CGCTGTTCCT CGTCGCCGGG
CCTGGTGCGG GCGTGCGAAG CTTCAAGGAG GCCATCTCCT CCAGCCAAGG CCGCTCGCTG
GGCTATGCCA CGCCGGGCAA TGGATCGCCC ATGCACTTCC TCGGCGAGAT GGTCCGGCGC
GCCACGGGCG CCCGCTTCGA GGCCATTCCC TACAAGGGCG TGGCGCCGGC CGTCACCGAT
GTGGTGGGCG GCCATGTGCC CTTCACCTAC AGCACGCTGG GCTCCATTGC TCCCTACCTG
CCCGGCGGCA AGCTGGTGGC GCTGGCCGTG GCCGATGCCC AGCGCTCACC GCTGGCGCCC
GACGTGCCCA CGCTGGCCGA GCTGGGCTAC AAGGACGTGG AGCTGACCGC CTGGTATGGC
CTGTTCGGCC CCAGGAACAT GCCCACCGAG GTGGTCAAGC TGCTGAACAC GCAGCTCAAC
GAGATCCTCA GGATGCCCGA CGTGGTGGCG CGCATGGCCA CGCTGGGAAC CGTCCCTGTG
GGCGGCCCGC CCCAGCGACT GGGCAAGACC AATGCCGGCG ATTTCGAGCG CTTCGGGCGG
CTGGTCAAGG AACTGGGCAT ACAGCCGGAC TAG
 
Protein sequence
MKALSMKAKR RTLALGAAMA LALLAGPAQA QTYPHKPVTI VVAYPAGGDT DALARLLGEK 
LSARIGQSVL VDNRAGASGT IGSSFVAKAP ADGYTLLLAP NTFAMAQLVL KLGTGHGYDV
LNGFTPVIEV GSTSLFLVAG PGAGVRSFKE AISSSQGRSL GYATPGNGSP MHFLGEMVRR
ATGARFEAIP YKGVAPAVTD VVGGHVPFTY STLGSIAPYL PGGKLVALAV ADAQRSPLAP
DVPTLAELGY KDVELTAWYG LFGPRNMPTE VVKLLNTQLN EILRMPDVVA RMATLGTVPV
GGPPQRLGKT NAGDFERFGR LVKELGIQPD