Gene Daci_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4880 
Symbol 
ID5750486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5394431 
End bp5394973 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID641299999 
Producthypothetical protein 
Protein accessionYP_001565894 
Protein GI160900312 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.783549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TCATCGACCA ACTGTCCCAG TACGCGGACT ATCACCGTGA TCCACGCAAC 
ATCCTCACGC ACTTCGTCGG CGTGCCGTTG ATCATGTGGG CGGTGGTGAT TTTGCTGGCC
CGCCTGCAGT GGGCTGCCCC CTTGGGCGAT GGCCTGCCCG AGCTGCCATT GAGCCTGGCC
CTGCTGGCGG CACTGGCGGC AGGCATCTAC TACTGTCTGC TGGACCTGCG CTACGGCATC
GCCATGGCCC TGGTGCTTGC CCTGATGCTG GCGCTGGCCC AGCCCATCGC CATGCTGCCG
ATGGGGGCTT GGCTGGGCTG GGGCCTGGGC ATCTTCGCCG TGGGCTGGGT GATCCAGTTC
GTGGGCCATT ACTACGAGGG CCGCAAGCCG GCTTTCCTGG ATGACATCGT GGGCCTGGTC
ATCGGGCCGC TGTTCGTGCT GGCCGAGCTG GGCTTTGCCC TGGGCCTGCG CCGCGAAGTG
CAGCATGCGG TGGAGCAGCG CAGCGGTCCC GTGCAGCGGC GCGCGGGCGG CGCACACGCC
TGA
 
Protein sequence
MKTLIDQLSQ YADYHRDPRN ILTHFVGVPL IMWAVVILLA RLQWAAPLGD GLPELPLSLA 
LLAALAAGIY YCLLDLRYGI AMALVLALML ALAQPIAMLP MGAWLGWGLG IFAVGWVIQF
VGHYYEGRKP AFLDDIVGLV IGPLFVLAEL GFALGLRREV QHAVEQRSGP VQRRAGGAHA