Gene Daci_4871 details

Gene Information

• Locus tag: Daci_4871
• ID: 5750477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Delftia acidovorans SPH-1
• Kingdom: Bacteria
• Replicon accession: NC_010002
• Strand: +
• Start bp: 5384280
• End bp: 5384825
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641299990
• Product: RDD domain-containing protein
• Protein accession: YP_001565885
• Protein GI: 160900303

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.945558
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGAACG CCACATCCCC CGCCTCCACC ACGGCAGCCG CAATCGCAGC CTCCCCACAG 
ATGGCCCCGC GACTGGCGCG GCGCATGGCC TGCTGGCTCT ACGAGGGCAT GCTGCTGTTC 
GGCGTGGTCT TCATTGCAGG CTATCTGTTC GGCACCCTGT CGCAGACACG CAATGCCATG 
GACAACCGCC ATGCGCTGCA GGCCTTCATG TTCGTGGTGC TGGGCATCTA TTTCGTCTGG 
TTCTGGTCCA AGGGCCAGAC GCTGGCCATG AAGACCTGGC ACATTCGCCT GGTGGATGCA 
GCGGGCCAGC CCGTCAGCCA GTTGCGCGCG CTGCGGCGCT ATGTGTTCAG CTGGATCTGG 
CTGCTGCCGC CACTGGCGGC CTATTCGACC GGCGTGCCTG CACTGACCAC GCTGATGCTG 
CTGGTGCTGT GGGTGGCGCT CTGGGCACTT CTGAGCCGCT TGCATCCGCG CCGCCAGTTC 
TGGCATGACG CATGGGCCGG CACCCAGTTG ATCCACCAGG CCCCGGCACC CAGGAAAAAG 
CGCTGA 

 

Protein sequence

MTNATSPAST TAAAIAASPQ MAPRLARRMA CWLYEGMLLF GVVFIAGYLF GTLSQTRNAM 
DNRHALQAFM FVVLGIYFVW FWSKGQTLAM KTWHIRLVDA AGQPVSQLRA LRRYVFSWIW 
LLPPLAAYST GVPALTTLML LVLWVALWAL LSRLHPRRQF WHDAWAGTQL IHQAPAPRKK 
R