| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4863 |
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| Symbol | |
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| ID | 5750469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5375587 |
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| End bp | 5377278 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299982 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001565877 |
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| Protein GI | 160900295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAAA ACCCTTCGAC CAAGTACCGT CCGTTCGCTT TCGCTCCCGT GCGTCTGCAA
AATCGCAGCT GGCCCGACGC GACGATTACC AAGGCTCCGA TCTGGTGCAG CGTGGATCTG
CGCGATGGCA ACCAGGCGTT GATCGAGCCC ATGGACATCG ATCGCAAGAT GCGCATGTTC
GAGCAGCTGG TGAAGATCGG CTTCAAGGAG ATCGAGGTCG GTTTTCCCTC CGCATCGCAG
GTGGAGTTCG ACTTCATGCG CAAGCTCATC GAGGAAAACC GCATTCCCGA TGACGTGACC
ATCCAGGTGC TGACCCAGGC GCGCGAGCAC CTCATCCGCC GTACCTTCGA AGCGCTCGAA
GGCGTGCCCC GTGCCATCGT CCATCTGTAC AACGCCACCG CGCCCGTGAT GCGCCGCGTG
GTGTTGAACA TGAGTGAAGA CGAGATCGTC GAGCTGGCCA CCACCAATGC CCGCATGTTC
AACGAGATCG CTGCCGGCTA CCCCCAGACG CAATGGACCT TCCAGTACTC GCCCGAGATG
TATTCGGACA CCGAGCTGGA GTTTTCCAAG CGCGTCATTG ATGCAGTCAC CGATGTATGG
CAGCCCACGA CCGAGCGCAA GTGCATCATC AACCTGCCCA CCACGGTGGA GCATTCCACG
CCCAATCTGT TTGCCGACAT GGTGGAGTGG ACGCACCGCC ACATCCAGCG CCGTGATTCC
ATCGTGCTGT CCGTCCATCC CCACAACGAT CGCGGCACGG GCACGGCCAC GGCCGAGCTC
GCGCTGATGG CCGGTGCCGA CCGCCTCGAA GGCTGCCTGT TCGGCAACGG CGAGCGCACG
GGCAACCTCG ACGTGGTCAA CGTGGCGCTG AACATGTACA TCCAGGGCGT GTCGCCCGGG
CTGGATTTCT CCGATATCGA CGGCATCCGC AGCACGGTCG AGCATTGCAA CCAGTTGCCC
GTGCACCCGC GCCATCCCTA CGTGGGCGAT CTGGTCTACA CCTCGTTCTC TGGCTCGCAC
CAGGATGCGA TCAAGAAGGC CTTCGCCGAC CGCAAGGAAG GCGACGTCTG GGACATGCCC
TATCTGCCCA TCGATCCCAA GGACCTGGGT CGCAGCTATG AAGCCGTGAT CCGCGTCAAC
AGCCAGTCGG GCAAGGGCGG CATCGCCTAT CTGCTTGAAA GCGAATATGG CCTCCAGTTG
CCGCGCCGCC TGCAGATCGA GTTCAGCCAG GTCGTGCAGC GCGAGATGGA TGCCAGCGGC
AAGGAATTGG CTGCCGCCGA CCTGTGGAAT CTGTTCCAGC GCGAATACGG CCTGCAATCC
GTGCAGGCGC CGCACTACCG GCTGAGCGAG AACGATGGTG TGGTCAGCCT GTCGGCCGAC
CTGGCCGTCG AGGGCGGCAA GCGCACGGTC GAGGCCGAGG GCACGGGTCC GATCGACGCC
TTCGTGCAGG CGCTGAGCGA GCACAGCGGC CGCGCGGTGC GCGTGCTGGA CTATGCCGAG
CACGCCATTG GCGAAGGTGC CAACGCCAAG GCCATCGCCT ATGTGGAACT GCGCGTGGAC
GAGTCCCACG TCTGCTACGG CGTCGGGGTC GATGCGAATA TCGTCTCTGC CTCTTTCCGG
GCCATCATGT CGGGCTTGCA GCGTGTTCCC TCCGCCGAGA ATGCGGTGGC GCAGGAGGCG
GTCGCCGCCT GA
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| Protein sequence | MLQNPSTKYR PFAFAPVRLQ NRSWPDATIT KAPIWCSVDL RDGNQALIEP MDIDRKMRMF
EQLVKIGFKE IEVGFPSASQ VEFDFMRKLI EENRIPDDVT IQVLTQAREH LIRRTFEALE
GVPRAIVHLY NATAPVMRRV VLNMSEDEIV ELATTNARMF NEIAAGYPQT QWTFQYSPEM
YSDTELEFSK RVIDAVTDVW QPTTERKCII NLPTTVEHST PNLFADMVEW THRHIQRRDS
IVLSVHPHND RGTGTATAEL ALMAGADRLE GCLFGNGERT GNLDVVNVAL NMYIQGVSPG
LDFSDIDGIR STVEHCNQLP VHPRHPYVGD LVYTSFSGSH QDAIKKAFAD RKEGDVWDMP
YLPIDPKDLG RSYEAVIRVN SQSGKGGIAY LLESEYGLQL PRRLQIEFSQ VVQREMDASG
KELAAADLWN LFQREYGLQS VQAPHYRLSE NDGVVSLSAD LAVEGGKRTV EAEGTGPIDA
FVQALSEHSG RAVRVLDYAE HAIGEGANAK AIAYVELRVD ESHVCYGVGV DANIVSASFR
AIMSGLQRVP SAENAVAQEA VAA
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