| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4862 |
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| Symbol | |
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| ID | 5750468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5373949 |
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| End bp | 5375487 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641299981 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001565876 |
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| Protein GI | 160900294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC AATTGATCAT TTTCGACACC ACCTTGCGTG ACGGCGAGCA GTCGCCCGGT
GCCTCCATGA CCCGCGACGA GAAGCTGCGC ATCGCGCGCC AGCTCGAACG GCTGAAGGTC
GATGTGATCG AGGCCGGTTT TGCGGCGAGC TCCAACGGTG ACTTCGAGTC GGTACAGGCC
ATTGCGCGCG CCATCAAGGA CTCCACCATC TGCTCGCTGG CGCGGGCCAA TGACCGTGAC
ATCGCCCGTG CGGCCGAGGC TCTGAAGGAC GCCAACCGCG CGCGCATCCA CACCTTCATT
GCGACCAGCG CGCTGCACAT GGAGAAAAAG TTGCGCATGA CGCCCGAGCA GGTGCTGGAG
CAGGCGCGCC AATCCGTGCG CTTTGCGCGC AACCTGATTG CCGACATCGA GTTCAGCCCG
GAGGACGGCT ACCGCAGCGA CCCGGATTTC CTGTGCCGCG TCATCGAGAC CGTGATCGCC
GAGGGCGCAA CCACGATCAA CGTGCCCGAC ACCGTGGGCT ATGCCATTCC CGAGCTCTAC
GGCGCCTTCA TCAAGAACCT GCGCGAGCGC GTGCCCAACA GCGACAAGGC GGTCTGGAGC
GTGCACTGCC ACAACGACCT GGGCATGGCC GTGGCCAACT CGCTGGCCGG CGTCAAGCTC
GGCGGCGCCC GCCAGATCGA ATGCACCATC AATGGCCTGG GTGAGCGCGC CGGCAACTGC
TCGCTGGAAG AGGTGGTGAT GGCCATCAAG ACGCGCAAGG ACTACTTTGG CCTGGACGTC
AACATCGACG CCCTGCATAT CGTGGCCGCC AGCCGCATGG TCAGCCAGAC CACCGGCTTC
GTGGTGCAGC CCAACAAGGC CGTGGTGGGG GCCAACGCCT TCGCCCATGC CTCCGGCATT
CACCAGGACG GCGTGCTCAA GGCGCGCGAC ACCTACGAAA TCATGCGTGC CGAGGACGTG
GGCTGGAGCG CCAACAAGAT CGTGCTGGGC AAGCTCAGCG GCCGCAACGC CTTCAAGCAG
CGCCTGCATG AACTGGGTGT GGAGCTGGAC AGCGAAGCTG CGATCAATAC CGCCTTTGCC
GCCTTCAAGG AGCTGGCCGA CCGCAAGAGC GAGATCTTCG ACGAGGACAT CCTGGCCCTG
GTGACCGAGC AGGACGCGCA TCAGCAGGCC GATCCCTTCC AGTTCATCTC GCTGGCCCAG
CAAAGCGAGA CAGGTGAGCG CCCACACGCG TCGGTGGTGT TCAGCCGCGA CGGCCGAGAG
ATCAAGGCCC AGTCCGACGG CAATGGCCCG GTCGATGCCT CGTTCAAGGC CATCGAGTCC
GAGGTGAAGA GCGGTGCCGA GATGCTGCTG TACTCGGTCA ACGCCATCAG CGGCTCCACC
GAAAGCCAGG GCGAAGTGAC CGTTCGCCTG CAGCGCAGCG GGCGCGTGGT CAACGGCGTG
GGCGCCGACC CTGACATCGT CGTGGCTTCT GCCAAGGCCT ACCTGAGCGC GTTGAACAAA
TTACACAGCA ATGCAGAGAT CGTGGCTGCA CAGGGGTAA
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| Protein sequence | MTDQLIIFDT TLRDGEQSPG ASMTRDEKLR IARQLERLKV DVIEAGFAAS SNGDFESVQA
IARAIKDSTI CSLARANDRD IARAAEALKD ANRARIHTFI ATSALHMEKK LRMTPEQVLE
QARQSVRFAR NLIADIEFSP EDGYRSDPDF LCRVIETVIA EGATTINVPD TVGYAIPELY
GAFIKNLRER VPNSDKAVWS VHCHNDLGMA VANSLAGVKL GGARQIECTI NGLGERAGNC
SLEEVVMAIK TRKDYFGLDV NIDALHIVAA SRMVSQTTGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWSANKIVLG KLSGRNAFKQ RLHELGVELD SEAAINTAFA
AFKELADRKS EIFDEDILAL VTEQDAHQQA DPFQFISLAQ QSETGERPHA SVVFSRDGRE
IKAQSDGNGP VDASFKAIES EVKSGAEMLL YSVNAISGST ESQGEVTVRL QRSGRVVNGV
GADPDIVVAS AKAYLSALNK LHSNAEIVAA QG
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