Gene Daci_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4861 
Symbol 
ID5750467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5372732 
End bp5373829 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID641299980 
Productpeptidase S11 D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_001565875 
Protein GI160900293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TACGCCGTGC CCGCCTCGGT CGATTTGCTC AGGTCATGTC CTTTCTGGCC 
CTGAGTTGTG CTCTTGCTGC TCCGGGCGCA CATGCCGCGC CCGCCAAGAA AGTTGCCAAG
AAACAGGTGG CCGTGGCCCC TGTCAAGAAG AAGGCGGTGA AGGAGCGCGC CACGGCCGCT
CCCCAGGGCA AGCGCGTTGC CAAGAGCGCG CGCCAGCCCA GCCGTGTCGC TGCACGCAGC
GTGGCCAGCC CCATTCGCGC CGTTGCCTAC GAGCCACGCC TGTCCTTCGG CCAGATGGCT
GGTCTGCATG CGGTGGCCGA TCCTCTGGAT CTCAAGAGCA GCGTGGCTCT GGTCCTGGAC
CAGGACACCC ATGAGGTGCT GCTGAGCAAG AACGACCACG CCGTCTTGCC CATCGCCTCG
TTGACCAAAC TGATGACCGG CCTGCTGATT TCCCAGGCCC ATCTGCCGAT GGATGAAGCC
ATCACCATCA CGCAGGACGA CGTGGATACC GAAAAGGGCA GCAGCTCGCG CTTGGCCGTC
GGCACCACGC TCACGCGCGG TGAAATGCTG CACCTGGCCC TGATGTCCAG TGAAAACCGC
GCTGCCCATG CCCTGGGCCG CACTTTCCCT GGTGGCCTTG ATGCCTTTGT CCAGCAGATG
AATGCCAAGG CCCGTCTGCT GGGCATGACC GATACCCGCT ACGTGGAGCC CACCGGGCTG
TCCAGCCGCA ACCAGTCCAG CGCCCGTGAT CTGGCTGTGC TCGTGAATGT GGCGCACAGC
GATCCGCTGG TGCGCGAGTA CACCACCTCG CCCGGCTATG AGGTGGCCGT GGGTCGCCGC
ACGCTGCAGT ACAACAACAC CAACCGCCTG GTGATGAGCC CCACCTGGGA CATCGGTCTG
CAAAAAACCG GCTACATCTC CGAGGCAGGC CGCTGCCTGG TCATGCAGGC GCAGGTGGCT
GGCCGCAAGA TCATCATGGT CTTCCTGGAT TCGGCAGGAA AGTTCAGCCG CCTCGGCGAT
GCCGAGCGCG TGCGCCACTG GGTGGAGTCC ATGGGGCAGG TGGCTGGCGA TCCCATGATC
CACAAGGTCA AGGGCTGA
 
Protein sequence
MPTLRRARLG RFAQVMSFLA LSCALAAPGA HAAPAKKVAK KQVAVAPVKK KAVKERATAA 
PQGKRVAKSA RQPSRVAARS VASPIRAVAY EPRLSFGQMA GLHAVADPLD LKSSVALVLD
QDTHEVLLSK NDHAVLPIAS LTKLMTGLLI SQAHLPMDEA ITITQDDVDT EKGSSSRLAV
GTTLTRGEML HLALMSSENR AAHALGRTFP GGLDAFVQQM NAKARLLGMT DTRYVEPTGL
SSRNQSSARD LAVLVNVAHS DPLVREYTTS PGYEVAVGRR TLQYNNTNRL VMSPTWDIGL
QKTGYISEAG RCLVMQAQVA GRKIIMVFLD SAGKFSRLGD AERVRHWVES MGQVAGDPMI
HKVKG