Gene Daci_4858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4858 
Symbolaat 
ID5750464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5370073 
End bp5370921 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content66% 
IMG OID641299977 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_001565872 
Protein GI160900290 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTGTG CAAGACTGCG GCTGCAGAGA ATACGAAACC ATTTCCTCCG TCCGCACCCG 
ATCATGTCCC ATCCCCTCCC ATGGCTCATC CCCCACCAGG CCTTCCCTCC TGTGGAAACG
GCATGGGGCC CCAACGACCC CATCCCGGGC CTGCTGGCCG CAGGCGGCAC GCTGGATGCG
GCACACCTGC GCATCGCCTA CAGCCAGGGG ATTTTTCCCT GGTTCAGCGA AGGCCAGCCA
ACGCTGTGGT GGTCGCCCGA TCCACGCATG GTGCTGCAGA CATCGCAATT CCGGCTGCAC
CGCAGCCTGC GCAAGACATT GCAGCGCTTT CGCGCCACGC CGGGCTGCGA GATCCGCATC
GACAGCGCGT TCGAGACCGT GATGCAGCAC TGCGCCCAGA CGGTGCGCCA CGACCAGGAT
GGCACCTGGA TCGTGCAGGA AATTCTTGAC GCCTATACCG ACCTGCACCA CCAGGGTGCA
GCCCACAGCG TGGAGACCTG GGTGGACGGA CGCCTGGTGG GCGGCCTGTA TTGCGTGGCA
CTGGGCCGCG CCGTGTTTGG CGAATCCATG TTCGCGCATG CCACCGACGC ATCCAAGATC
GCGCTGGCGG CCCTGGTTGC GCTGTGCAGA CACCAGGGCG CCGCGCAGAT CGATTGCCAG
CAGGCCACGC AGCATCTGGC CTCGCTGGGC GCGCGCGAAA TGCCGCGCGC CCGGTTCCTG
CAAACCGTGG CCGAGCAAAG CCAGCTGCCG CCCATGCGCT GGCAGTTCGA AAACGTATAC
TGGGACGCGT TGCTGCCACC GTCCGGCGAG GCTGGCGACA CATCACCGGC TGCCGCCAGC
ACACCATGA
 
Protein sequence
MVCARLRLQR IRNHFLRPHP IMSHPLPWLI PHQAFPPVET AWGPNDPIPG LLAAGGTLDA 
AHLRIAYSQG IFPWFSEGQP TLWWSPDPRM VLQTSQFRLH RSLRKTLQRF RATPGCEIRI
DSAFETVMQH CAQTVRHDQD GTWIVQEILD AYTDLHHQGA AHSVETWVDG RLVGGLYCVA
LGRAVFGESM FAHATDASKI ALAALVALCR HQGAAQIDCQ QATQHLASLG AREMPRARFL
QTVAEQSQLP PMRWQFENVY WDALLPPSGE AGDTSPAAAS TP