Gene Daci_4854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4854 
Symbol 
ID5750457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5366136 
End bp5367629 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content66% 
IMG OID641299970 
Productxanthine permease 
Protein accessionYP_001565868 
Protein GI160900286 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA GTTCTGGCAA TGCGCCGGCC CTGGGTACAG ACATCCGCCC GGAGGACGAG 
CAACTCGGCC TCACGGCCAA CACCCTCTAT GGTTTGCAGC ATGTGCTGAC CATGTACGGA
GGCATCGTGG CCGTGCCCCT GGTCATGGCC AATGCGGCCG GCATGTCGGC GGCCGACACG
GGCCTGCTGA TCACGGCCTG CCTTTTCATG GGCGGGCTGG CCACGCTGCT GCAGACGCTG
GGCATTCCGT TCTTCGGCTC GCGCCTGCCG CTGGTGCAGG GCGTGTCCTT CTCGGGCGTG
GCCACCATGG TCAGCATCCT GCACACGGGT GGCGGCATGC AGGGCGTGCT GGGCGCCGTG
CTCTTTGCCT CGGTGTTCGG CCTGATCATT GCGCCCATTT TTTCCAAGCT CACCCGGTTT
TTCCCGCCGC TGGTCAATGG CTGCGTGATC ACCATCATCG GCCTGTCGCT GATGCCGGTG
GCAGCCCACT GGGCCATGGG CGGCAATCCG CAGGCGGCCG ACTACGGCAG CATGGGCAAC
ATCGGGCTGG CGGGCCTGTC GCTGGTCATC GTGCTGGCGC TGAGCAAGCT GGGCAACGCC
ATGATCTCGC GCCTGTCCAT CCTGCTGGCC ATCGTCATCG GCACGGCGGT GGCGGCCATG
ATCGGCAAGT CCGACTTTTC CGAGGTGGGC AGCGGCGCCT GGTTCGCCGT GCCCATGCCG
CTGCACTTCG GCTGGCCGAC CTTCAGCCTG GCGGCGACCC TTTCCATGTC CATCGTGATC
CTGGTGACCC TGGTGGAAAC CTCGGCCGAC ATCCTGGCCG TGGGCGACAT CGTGGGCACC
CGCGTGGATT CGCGCCGCCT GGCCGACGGC CTGCGCGCCG ACATGCTGTC CAGCGTGGTG
GCGCCGTTCT TCGGCTCGTT CACGCAGAGC GCCTTTGCCC AGAACGTGGG CCTGGTCGCG
GTCACGGGCA TCAAGAGCCG TTATGTCGTG GCCTTCAGCG GGCTGATCCT GATCGCCTTC
GGCCTGCTGC CCATCATGGG GCGCATCGTG GCCTGCGTGC CGCCCTCGGT GCTGGGCGGC
GCGGGCCTGG TGCTCTTTGG CACGGTGGCG GCCAGCGGCA TCCGCACGCT GGCCAAGGTG
GACTATCACA ACAACATGAA CCTGATCATC GTGGCGGCGT CCATCGGCAT GGGCGTGCTG
CCCATGGTCA AGCCGGACTT CTATCACCAC TTCCCGGACT GGTTCGCCAC CATGTTCCAT
TCGGGCATCA GCTCCACGGC GGTGACCGTG CTGCTGCTGA ACCTGGTCTT CAACCACTTC
AAGCAGGGCA ACCCCGAGGA GCCTTCGGTG TTCGGCGCAG GTTCTGAGCG CGTGCTCAGC
GAGGCCGTGC TGTCTGCCCT GGCCGATGGC GACCGGGTGG TCGACGGCAA GCTCTATGAC
CGCGAGGGCA AGGAAGTGGC CACGGTGTCG GCGCCTGCGG CTGCCATGCA CTGA
 
Protein sequence
MEKSSGNAPA LGTDIRPEDE QLGLTANTLY GLQHVLTMYG GIVAVPLVMA NAAGMSAADT 
GLLITACLFM GGLATLLQTL GIPFFGSRLP LVQGVSFSGV ATMVSILHTG GGMQGVLGAV
LFASVFGLII APIFSKLTRF FPPLVNGCVI TIIGLSLMPV AAHWAMGGNP QAADYGSMGN
IGLAGLSLVI VLALSKLGNA MISRLSILLA IVIGTAVAAM IGKSDFSEVG SGAWFAVPMP
LHFGWPTFSL AATLSMSIVI LVTLVETSAD ILAVGDIVGT RVDSRRLADG LRADMLSSVV
APFFGSFTQS AFAQNVGLVA VTGIKSRYVV AFSGLILIAF GLLPIMGRIV ACVPPSVLGG
AGLVLFGTVA ASGIRTLAKV DYHNNMNLII VAASIGMGVL PMVKPDFYHH FPDWFATMFH
SGISSTAVTV LLLNLVFNHF KQGNPEEPSV FGAGSERVLS EAVLSALADG DRVVDGKLYD
REGKEVATVS APAAAMH