Gene Daci_4835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4835 
Symbol 
ID5750438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5340080 
End bp5341318 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content69% 
IMG OID641299951 
Producthypothetical protein 
Protein accessionYP_001565849 
Protein GI160900267 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGGC GCCTAGGCTG GTGCCTCGGC CTGCCGGTGC GAGTCTTGCG AGGCTCGCTT 
GCCGTTTGCA GGCGTCAGTC ACCATTGGCT GTCCGCCCCG TGGCGACCGC GCCCTGCTGC
AAGCCGGGAT GCGGCATTCA CCATGCTGCG GCGGGCGGCG CACAACGCGA GGCCCCCACC
ATGCTGTCTG CCCACGATTC GACCGTGTCT TCCTCTGCCC TGGCATCGCG CGCCCAGCGC
GTGCCGCTGC CTTTGCCTTC GGCGCCGCGT GCGCCCGCCG AAGGCGGCAG GCGCGAGGCG
GCCCCGGAAT GGGCGGACCA CGCACTGCGC GCGACCCGCG CCGAGCTGCA GCACGGGCTG
ATGCAGCCCC AGGCCCAGGT CTCTCCCAAA TACCTCTACG ACGCGCGCGG CTGCGACCTG
TTCGAGCAGA TCACGCGGCT GCCCGAGTAC TACCCCACGC GCACCGAGGC CGCCATCCTG
GCCGACTCTG GCGCCGCCAT GGCCGAGGCC CTGCGCGGCA GCGAGGTGCT GATCGAGCTG
GGCGCCGGCA ATTGCGAGAA GGTGCGCGGC CTGTGCCGCA GCCTGCGGCC ACGGCATTTC
GTGGGCGTGG ACATTGCGGG CGCGTTCCTG CGCCAGTCCG TGCGGCGGCT GGCCGAGGAG
TTTCCGCAGC TGCAGACCCA TGCCGTCACG GCCGACATCA CCGAGCCGCT GACCCTGCCG
CCCCATATCC CGCAGGCCGG GCGGCTGCTG TTCTATCCGG GTTCGTCCAT CGGCAATTTC
GACCCGGTAC AGGCCCAGCG CATGCTGGGC CAGATGCGTG CCATGGTCAA CGACGACGGC
GGCCTGCTGA TCGGCATAGA CCTGCCCAAG TCCACGCAAT GGCTGGAGCC CGCCTATGAC
GATGCCCAGG GCGTGACGGC GCGCTTCAAC CTGAACCTGC TCAGCCACGT CAACAGCCTG
CTGGGCAGCG ACTTCAACCC GGACGACTGG GAGCATGTGG CCTTCTTCAA CGCCGAGCAT
TCGCGCATCG AGATGCACCT GCGCGCGCGC CGCCCGCTGA TCGTGGGCTG GCCGCAGGGG
CTGCGGCATT TCTCGGCCGG CGAGACCATC CACACCGAAA ACAGCTACAA GTACCCGCTG
CCCGAATTCC TGGGCATGCT CGCCTGCGCG GGCTTCGGGC CCTGCCAGGT CTGGACGGAT
GAGCGCCAGT GGTTTGCCGT GATCCATGCC CATGCGTGA
 
Protein sequence
MGRRLGWCLG LPVRVLRGSL AVCRRQSPLA VRPVATAPCC KPGCGIHHAA AGGAQREAPT 
MLSAHDSTVS SSALASRAQR VPLPLPSAPR APAEGGRREA APEWADHALR ATRAELQHGL
MQPQAQVSPK YLYDARGCDL FEQITRLPEY YPTRTEAAIL ADSGAAMAEA LRGSEVLIEL
GAGNCEKVRG LCRSLRPRHF VGVDIAGAFL RQSVRRLAEE FPQLQTHAVT ADITEPLTLP
PHIPQAGRLL FYPGSSIGNF DPVQAQRMLG QMRAMVNDDG GLLIGIDLPK STQWLEPAYD
DAQGVTARFN LNLLSHVNSL LGSDFNPDDW EHVAFFNAEH SRIEMHLRAR RPLIVGWPQG
LRHFSAGETI HTENSYKYPL PEFLGMLACA GFGPCQVWTD ERQWFAVIHA HA