| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4826 |
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| Symbol | |
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| ID | 5750429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5329117 |
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| End bp | 5330679 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299942 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001565840 |
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| Protein GI | 160900258 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0178748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.551416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGT ATCTCACCCA GGCCATCCAC AAGGGCCGCC GCGAAAGGGC CGGCGCCACG
GCGGCCATCT GCGGCGAAGA GCAGGCCAGC TGGTCGCAGC TTGCGCAGCG CATCGAACGC
TGTGCCGGCC TGCTGCGGGC GCTGGACGTG GCGCCCGGCG ACCGCGTCGG CATGATGGGA
CTGAACTCCA TCCGCTACCT TGAATACTTC TATGGCTGCT GGTGGGCAGG CGCCGCGGTC
AACCCCGTCA ACATCCGCTG GAGCGCGCAG GAGGTGGCCT ACTCGCTGGA CGACTGCGAC
ACGCGCGTGC TCTTTGTGGA CGATGCCTTC GCGCCCCTGG TGCCCCGGCT GCGCGAGCTG
TCCTCCAGCC TGCACACCGT GGTGTTCTGC GGCACGGGCG CCGCGCCCGA AGGCGCTCTG
CACTACGAGC AATTGCTGGC CGCCGCCACG CCCTGCGCCG ACGCGCTGCG CAGCGGCAAC
GACCTGGCCG CCGTGATGTA TACGGGCGGC ACCACGGGCC GGCCCAAGGG GGTGATGCTC
AGCCACGACA ACCTGTTCAT CAACGCCCTG TCCAATGCCA GCAACGTGCC GCGCCAGCAT
GTGAAGGTGG GCATGGTGGT CACGCCCATG TTCCATGTGG CCGGCTGCGG CCTGGCCCTG
CTCATGGCCC AGCGCCTGGT GCCCCAGGTC ATCGTGCCGG CATTCGACGA GCTGGCCATC
CTCGCCGGCA TCCAGCAGCA CGGCGTGAAC GAGCTGTTCC TGGTGCCCAC CATGATCCGC
CGGCTGATCG AGCATCCGCG CCTGGCCGAA TTCGATCTGT CCAGCCTGCG CCTCATGCTC
TATGGCGCGG CGCCCATCGA TGCCACCTTG CTGGAGCGCG CCATGCAGCT GCTGCCCGGA
GCCGACTTCG CCCAGGCCTA CGGCATGACC GAGCTGTCGC CCACCATCGT GTCCATGGGC
CCGGCCGAGC ACCGTCCCGG CCCGCAGCGC GAGCGCCTGC TGCGCGCGGC CGGCCGGCCC
GTGACCATTG CCGAGGTGCG CATCGTCGAT GGCGAGGGCC GCGAGCTGCC GCCTGGCGAG
GTGGGCGAGA TCACGGCGCG CGGCCCCATG GTCATGCAGG GCTACTGGAA CAGGCCCGCC
GAGACGGCCG CCGCGCTCAA GGACGGCTGG ATGCACACGG GCGACATGGG CCGGCTGGAT
GCCGACGGCT ACCTCTTCGT CGTGGACCGG CTCAAGGACA TGATCGTCAG CGGCGGCGAG
AACGTGTACT CGGCCGAGGT CGAGAACGCC ATCGCCCAGC TGTCCCAGGT CGCCATGTGC
GCCGTCATCG GCGTGCCCGA CGAACGCTGG GGCGAGCGCG TGCACGCCGT GATCGTCGCG
CGCGAGGGCC AGCCGCTGAC CGAGGCCGAG GTCATCGCCC ACTGCCGCGA ACGCATCGCG
GGCTACAAGT GCCCGCGCTC GGTGGAGTTC CGCGCCGAGC TGCCGCTGTC GGCCGCCGGC
AAGCTGCAGA AATTCCAGCT GCGCGAACCC TACTGGCAGG GCCGCGAACG CCGCATCAAC
TGA
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| Protein sequence | MPMYLTQAIH KGRRERAGAT AAICGEEQAS WSQLAQRIER CAGLLRALDV APGDRVGMMG
LNSIRYLEYF YGCWWAGAAV NPVNIRWSAQ EVAYSLDDCD TRVLFVDDAF APLVPRLREL
SSSLHTVVFC GTGAAPEGAL HYEQLLAAAT PCADALRSGN DLAAVMYTGG TTGRPKGVML
SHDNLFINAL SNASNVPRQH VKVGMVVTPM FHVAGCGLAL LMAQRLVPQV IVPAFDELAI
LAGIQQHGVN ELFLVPTMIR RLIEHPRLAE FDLSSLRLML YGAAPIDATL LERAMQLLPG
ADFAQAYGMT ELSPTIVSMG PAEHRPGPQR ERLLRAAGRP VTIAEVRIVD GEGRELPPGE
VGEITARGPM VMQGYWNRPA ETAAALKDGW MHTGDMGRLD ADGYLFVVDR LKDMIVSGGE
NVYSAEVENA IAQLSQVAMC AVIGVPDERW GERVHAVIVA REGQPLTEAE VIAHCRERIA
GYKCPRSVEF RAELPLSAAG KLQKFQLREP YWQGRERRIN
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