| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4819 |
|---|
| Symbol | |
|---|
| ID | 5750422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5321274 |
|---|
| End bp | 5321999 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641299935 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001565833 |
|---|
| Protein GI | 160900251 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0621647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCAC TGCTTGAAAT CCGCGGACTG CATGCGGCCT ACGGGTCGGT GCGCGTGCTG
GACGGCATCG ACATGGACCT GGCCGAAGGC CGCGTCACGG CCCTGCTGGG CGCCAACGGC
GCGGGCAAGA CCACCACGCT GCGCGCCATC TGCCGCCATC TGGTGGACAC GCGCGGCGAG
GTGCGCCTGG CCGGCGAACG CATAGACCGG CACAGCACCG AGCGCATCGC GCGCCAGGGC
GTGGGCCATG TGCCCGACGG GCGCGGCACC TTCGCCCAGC TCAGCGCCGA GGACAACCTG
CGCCTGGGCG CGCAGGCCCG GCCCACGCGC GCTGCCCGTG CCGACGTGGG CGGCGATATG
GAGCGCATGT TCGGCTACTT CCCCCGCCTG CGCGAGCGCC GCACCCAGCA GGCCGGCACG
CTGTCGGGCG GCGAGCAGCA GATGCTGGCC ATTGCCCGCG CCCTCATGGG CCGCCCGCGC
CTGCTGCTGC TGGACGAGCC CTCCTTCGGG CTGGCGCCGC TGGTGGTGCG CGACATCTTC
GGCATCCTGC GGCGCATCAA CGCCGAGCAG GGCACGACCA TCCTGCTGGT GGAGCAGAAC
GCGCGCCTGG CGCTGGAGCT GGCGCACAGC GCCTACCTGC TGGAGACCGG CCGCATCGTG
CTGCACGGTC CCAGCGAAGC CATGCGCCGC AACGATGCGG TGCGCCAGGC CTATCTCGGG
GAGTAG
|
|---|
| Protein sequence | MPALLEIRGL HAAYGSVRVL DGIDMDLAEG RVTALLGANG AGKTTTLRAI CRHLVDTRGE
VRLAGERIDR HSTERIARQG VGHVPDGRGT FAQLSAEDNL RLGAQARPTR AARADVGGDM
ERMFGYFPRL RERRTQQAGT LSGGEQQMLA IARALMGRPR LLLLDEPSFG LAPLVVRDIF
GILRRINAEQ GTTILLVEQN ARLALELAHS AYLLETGRIV LHGPSEAMRR NDAVRQAYLG
E
|
|---|
| |