Gene Daci_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4817 
Symbol 
ID5750420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5319212 
End bp5320396 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content71% 
IMG OID641299933 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001565831 
Protein GI160900249 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0652865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG CATACATCGT TGCCGCCACG CGCACGGCGG GCGGCAAGCG CGGCGGAAAG 
CTCTCGGGCT GGCATCCGGC CGATCTCGCG GCCCAGGTGC TGGACGAGCT GGTGCGCCGC
AGCCAGGCCG ACCCGGCCCA GGTCGAGGAC GTGATCATGG GCTGCGTCAG CCAGGTCGGC
CAGCAGGCGA CGAACGTGGC GCGCAACGCG GTGCTGGCCT CGTCCCTGCC CGAGTCCGTG
CCGGGCACCA CGGTGGACCG GCAGTGCGGG TCGTCCCAGC AGGCACTGCA TTTCGCGGCC
CAGGCCGTGA TGTCGGGCAG CATGGACATG GTGATCGCCG CGGGCGTGGA GAGCATGTCG
CGCGTGCCCA TGGGCACGCC CAACGCCCTG CCCGCCAAGG CCGGCCTGGG CGTCTACATG
AGCCCGGCCA TGCAGCAGCG CTACCCGGGC GTGGAGTTCA GCCAGTTCAT GGGCGCCGAG
ATGATGGCCG GCAAGTACGG CCTGGCCAAG GACCAGCTGG ACGCCTATGC GCTGCAAAGC
CATGAGCGCG CCGTGCAGGC CGCGCGCGAG GGCCGCTTCG ACCGCGAGAT CCTGGCCGTG
CAGGCGCGCA GCGCCGAAGG CGGTGCCGAG GGCGAAGGCC AGCCGCACAC GGTGGACGAA
GGCATACGCT TCAATGCCAC GCTGGAGGGC ATTGCCGGCG TCAAGACCAT CCGCGAGGGC
GGCTGCGTGA CGGCGGCCAC GGCCAGCCAG ATCTGCGATG GCGCCAGCGG CGTCATGGTG
GTCAGCGAGC GCGGCCTCAA GGCCCTGGGC GTGCAGCCGC TGGCGCGCAT CCACCACATG
AGCCTGCTGG GGCATGACCC CGTGATCATG CTGGAGGCCC CCATCCCCGC CACCCAGGCC
GCGCTGAAGA AGGCCGGCAT GCGCATCTCC GACATCGACC TGTACGAAGT CAACGAGGCC
TTCGCCCCCG TGCCCCTGGC CTGGCTGCAG GCCACGGGCG CCGATCCGGC GCGGCTCAAC
GTCAACGGCG GCGCCATTGC GCTGGGCCAT CCGCTGGGCG CCTCGGGCAC CAAGCTCATG
GCCACGCTGA TCCACGCCCT GCATGCGCGC GGCGGGCGCT ACGGCCTGCA GACCATGTGC
GAAGGCGGGG GCATGGCCAA CGTCACCATC ATCGAGCGTC TTTAG
 
Protein sequence
MAQAYIVAAT RTAGGKRGGK LSGWHPADLA AQVLDELVRR SQADPAQVED VIMGCVSQVG 
QQATNVARNA VLASSLPESV PGTTVDRQCG SSQQALHFAA QAVMSGSMDM VIAAGVESMS
RVPMGTPNAL PAKAGLGVYM SPAMQQRYPG VEFSQFMGAE MMAGKYGLAK DQLDAYALQS
HERAVQAARE GRFDREILAV QARSAEGGAE GEGQPHTVDE GIRFNATLEG IAGVKTIREG
GCVTAATASQ ICDGASGVMV VSERGLKALG VQPLARIHHM SLLGHDPVIM LEAPIPATQA
ALKKAGMRIS DIDLYEVNEA FAPVPLAWLQ ATGADPARLN VNGGAIALGH PLGASGTKLM
ATLIHALHAR GGRYGLQTMC EGGGMANVTI IERL