| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4816 |
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| Symbol | |
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| ID | 5750419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5318296 |
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| End bp | 5319078 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299932 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001565830 |
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| Protein GI | 160900248 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.118579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTG ACGCAAGCAT CAGCGCCGTC GTCACGGGCG GGGCATCGGG CCTGGGCGCG
GCCACCGCGC GCCGCCTGGC CGCCAAAGGC GTGCGCGTTG CCCTGTTCGA CCTCAACGAG
ACGGCCGGGC AGGCGCTGGC GCGCGAGACA GGCGGCCTGT TCTGCCGCGT GGACGTGACC
GACGAGGCCA GCGTGGACGC GGGCTTTGCC CAGGCGCGCG CGGCCCATGG GCAGGAGCGC
ATCCTGGTCA ACTGCGCAGG CACGGGCAAT GCCGTCAAGA CCGCCAGCCG CGACAAGGCT
ACGGGCGAGA TCCGGCACCT GCCCGTGGCC AATTTCGACC GCATCATCCA GATCAACCTG
GTGGGCACCT TCCGCTGCAT CGCCAAGTCG GCGGCGGGCA TGCTCACGCT GCAGCCGCTG
GCCGACGGCG AGCGCGGCGC CATCGTGAAC ACCGCCTCGG TGGCGGCGCA GGACGGGCAG
ATGGGCCAGG CCAGCTACTC GGCCAGCAAG GCCGGCATCA CGGGCATGAC CCTGCCCATT
GCGCGCGACC TCATGGGCGA GGGCATCCGC GTGAACACCA TCCTGCCCGG CATCTTCGAC
ACCCCGCTGC TGCAGGGCGC GCCCGACAAC GTGAAGGCCG CGCTGGCCGC CTCCGTGCCC
TTTCCCAAGC GGCTGGGCCA GCCCGACGAA TACGCCCACC TGGCCGAGAC CATGATCACC
AACGGCTACT TCAACGGCGA GTGCGTGCGC CTGGACGGTG CCATCCGCAT GGCGCCGCGC
TAG
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| Protein sequence | MQLDASISAV VTGGASGLGA ATARRLAAKG VRVALFDLNE TAGQALARET GGLFCRVDVT
DEASVDAGFA QARAAHGQER ILVNCAGTGN AVKTASRDKA TGEIRHLPVA NFDRIIQINL
VGTFRCIAKS AAGMLTLQPL ADGERGAIVN TASVAAQDGQ MGQASYSASK AGITGMTLPI
ARDLMGEGIR VNTILPGIFD TPLLQGAPDN VKAALAASVP FPKRLGQPDE YAHLAETMIT
NGYFNGECVR LDGAIRMAPR
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