| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4811 |
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| Symbol | |
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| ID | 5750414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5310135 |
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| End bp | 5312141 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299927 |
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| Product | peptidase U32 |
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| Protein accession | YP_001565825 |
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| Protein GI | 160900243 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0604959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCC TGCCCCACCA GCTCGAACTC CTGTCACCCG CGCGCGATGC CGACATCGGC
ATCGAGGCCG TGAACCATGG CGCCGACGCC GTCTACATCG GCGGCCCCGC CTTCGGCGCG
CGCGCCACGG CAGGCAACGA CATCCGCGAC CTGCAGCGGC TGATCAACCA CGCGCACCGC
TTCGGCAGCC GCATCTTCAT CACGCTCAAC ACCATCCTGC GCGACGATGA ACTCGAGGCC
GCGCGCAAGA TGGCCTGGCA GATCTACGAG GCCGGTGCCG ACGCGCTGAT CATCCAGGAC
ATGGGACTGC TGGAGCTGGA CCTGCCACCC ATCCAGCTGC ACGCCAGCAC CCAGACCGAC
ATCCGCACGC CCGAGAAGGC GCGCTTTCTG CAGGACGCCG GCCTGTCGCA GATCGTCGTT
GCGCGCGAGC TGGACCTGCA GCAGATCGCC GCCGTGCGCG CGGCCACCGA CCCGGCGCGC
ACCACCATCG AATTCTTCGT GCACGGCGCG CTGTGCGTGG CCTACTCGGG CCAGTGCTAC
ATCACCCACG CCCACACGGG CCGCAGCGCC AACCGCGGCG ACTGCAACCA GGCCTGCCGC
CTGCCCTACG AGGTGCTGGA CGCGAGCGGC CGCATCATCG CCCACGAAAA GCACGTGCTG
TCCATGAAGG ACAACAACCA GAGCGACAAC CTGCGCGCCC TGATCGACGC CGGCGTGCGC
AGCTTCAAGA TCGAGGGCCG CTACAAGGAC ATGGGCTACG TGAAGAACAT CACGGCCCAC
TACCGCAAGC TGCTGGACGA AATCATCGAG GAGCGCGAGT TCTCCGACAC GCCCCTGGCG
CGCTCATCCT CGGGCAGCAC CACGTTCAGC TTCACGCCCG ACCCCGACCA GAACTTCAAC
CGCGAGTTCA CCGACTACTT CGTCAACGGC CGCAAGGAAG ACATCGGCGC CTTCGACACG
CCCAAGACGC CGGGCCGCGC GATCGGCTGG GTCACCAAGG TGGGCGAGAA CTTCGTGGAG
ATCGAGACCT CGAGCCGCGA CACCGAACTG CACAACGGCG ACGGCCTGTG CTACTACGAC
CTGCAAAAGG AACTGGTGGG CCTGCAGATC AACCGCGCCG AATCGGTGGA TGCGAAGAAG
TCGCTGTGGC GCCTGTTCCC CAAGGACCCC ATCGCCGGCT TCAAGGACCT GCGCAAGGGC
CTGGAGGTCA ACCGCAACCG CGACATGGCC TGGGTGCGCA CGCTGGACAA GAAGTCCAGC
GACCGCCGCA TCGGCCTGTG GGCCGAACTC AAGGAAACGC CTGACGGCTT TGCGCTCACG
CTGACCGACG AGGACGGCTT CACTGCCACC GCCGCCATCG CGCAGGAACA CCAGGCCGCC
ACCGACGCAG CCCGTGCCGA GGCCACGCTG CGCGAGCAAC TGGGCCGCTT CGGCGCCACC
ATCTTCTCCG TGCATGACAT CGGCCTGCAG CTGAGCCAGC CCTGGTTCGT GCCGGCCTCG
GCCCTGAACC AGCTGCGCCG CGACGCCGTC GCCGCGCTGG AGGCCGCGCG CCAGGCCGGC
TTCGTGCGCC TGCCGCGCGC CCTGCCCGTG GAGCCGCCCG TGCCCTTCCC CGAGGACACG
CTGACCTATC TGGCCAACGT CTACAACCAG AAGGCACACG ACTTCTACAT CAAGCACGGC
GTCAAGGTCA TGGACGCGGC CTACGAGAGC AAGGAAGAAG AAGGCGAAGT CAGCCTGATG
ATCACCAAGC ATTGCGTGCG CTTTTCCATG AGCCTGTGCC CCAAGCAGGC CAAGGGCGTG
ATCGGCGTCA AGGGCACCAT CAAGGCCGAG CCGCTGCAGC TGATCAACGG CAAGGAAAAA
CTCACGCTGC GCTTCGACTG CAAGCCCTGC GAGATGCACG TGGTCGGCAA GATGAAGCGC
GCGGTGATCA ACCAGCACGC CAAGGAAATG CAGGAGTTTC CGATGCAGTT CTACCGCACG
CGGCCCGTGC CCTCGGCCAG CGCCTGA
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| Protein sequence | MSLLPHQLEL LSPARDADIG IEAVNHGADA VYIGGPAFGA RATAGNDIRD LQRLINHAHR
FGSRIFITLN TILRDDELEA ARKMAWQIYE AGADALIIQD MGLLELDLPP IQLHASTQTD
IRTPEKARFL QDAGLSQIVV ARELDLQQIA AVRAATDPAR TTIEFFVHGA LCVAYSGQCY
ITHAHTGRSA NRGDCNQACR LPYEVLDASG RIIAHEKHVL SMKDNNQSDN LRALIDAGVR
SFKIEGRYKD MGYVKNITAH YRKLLDEIIE EREFSDTPLA RSSSGSTTFS FTPDPDQNFN
REFTDYFVNG RKEDIGAFDT PKTPGRAIGW VTKVGENFVE IETSSRDTEL HNGDGLCYYD
LQKELVGLQI NRAESVDAKK SLWRLFPKDP IAGFKDLRKG LEVNRNRDMA WVRTLDKKSS
DRRIGLWAEL KETPDGFALT LTDEDGFTAT AAIAQEHQAA TDAARAEATL REQLGRFGAT
IFSVHDIGLQ LSQPWFVPAS ALNQLRRDAV AALEAARQAG FVRLPRALPV EPPVPFPEDT
LTYLANVYNQ KAHDFYIKHG VKVMDAAYES KEEEGEVSLM ITKHCVRFSM SLCPKQAKGV
IGVKGTIKAE PLQLINGKEK LTLRFDCKPC EMHVVGKMKR AVINQHAKEM QEFPMQFYRT
RPVPSASA
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